RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 C3orf36Q3SXR2 165 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 LRRC10Q5BKY1 277 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 SSX3Q99909 188 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 ARHGAP32A7KAX9 2087 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 CD3EP07766 207 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 GATA2P23769 480 aaPredicted RBP8.96□□□□□ -0.97
DDX56-203ENST00000421223 CD81P60033 236 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 HSPE1P61604 102 aaKnown RBP8.96□□□□□ -0.97
DDX56-203ENST00000421223 SLC24A4Q8NFF2 622 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 Q8WTZ3 238 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 HARBI1Q96MB7 349 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 GAL3ST2Q9H3Q3 398 aa8.96□□□□□ -0.97
DDX56-203ENST00000421223 A0A087WWC5 75 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 C15orf61A6NNL5 157 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 VDAC2P45880 294 aaPredicted RBP8.96□□□□□ -0.98
DDX56-203ENST00000421223 PAX5Q02548 391 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 SLC35E3Q7Z769 313 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 TMEM170AQ8WVE7 144 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 DDB2Q92466 427 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 COL12A1Q99715 3063 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 PLEKHA3Q9HB20 300 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 RNF24Q9Y225 148 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 PXMP4Q9Y6I8 212 aa8.96□□□□□ -0.98
DDX56-203ENST00000421223 SHISA9B4DS77 424 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.987e-8■□□□□ 9
DDX56-203ENST00000421223 FCN3O75636 299 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 KIR2DS2P43631 304 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 NCMAPQ5T1S8 102 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 CTSZQ9UBR2 303 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 WDR83OSQ9Y284 106 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 LINC00312Q9Y6C7 94 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 LY86O95711 162 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 SNRPCP09234 159 aaKnown RBP8.95□□□□□ -0.98
DDX56-203ENST00000421223 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 NAV3Q8IVL0 2385 aa8.95□□□□□ -0.98
DDX56-203ENST00000421223 IGHV1-69-2A0A0G2JMI3 117 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 C11orf94C9JXX5 98 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 AP4M1O00189 453 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 APOA2P02652 100 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 SAA1P0DJI8 122 aaPredicted RBP8.94□□□□□ -0.98
DDX56-203ENST00000421223 NDUFA6P56556 154 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 C10orf55Q5SWW7 151 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 TEX36Q5VZQ5 186 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 WDR25Q64LD2 544 aaPredicted RBP8.94□□□□□ -0.98
DDX56-203ENST00000421223 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
DDX56-203ENST00000421223 ZNF439Q8NDP4 499 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 MGST2Q99735 147 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 COMMD5Q9GZQ3 224 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 CACNA1BQ00975 2339 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ASH1LQ9NR48 2969 aaKnown RBP8.94□□□□□ -0.98
DDX56-203ENST00000421223 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ATP5G3P48201 142 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 TMPRSS3P57727 454 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ELOBQ15370 118 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ABHD5Q8WTS1 349 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ADTRPQ96IZ2 230 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 GPR61Q9BZJ8 451 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 PARLQ9H300 379 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ZNF835Q9Y2P0 537 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 DCHS2Q6V1P9 2916 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 A0A0U1RQK1 487 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 PGPEP1LA6NFU8 196 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 CIDEAO60543 219 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 IGFBP2P18065 325 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 COX7A1P24310 79 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 CDSNQ15517 529 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ARSJQ5FYB0 599 aaPredicted RBP8.94□□□□□ -0.98
DDX56-203ENST00000421223 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 ACY3Q96HD9 319 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 VKORC1Q9BQB6 163 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 NPVFQ9HCQ7 196 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 GAB2Q9UQC2 676 aa8.94□□□□□ -0.98
DDX56-203ENST00000421223 TANC2Q9HCD6 1990 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 KBTBD11O94819 623 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 REG1AP05451 166 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 ODF1Q14990 250 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 C9orf152Q5JTZ5 239 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 SAPCD1Q5SSQ6 148 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 FAM216AQ8WUB2 273 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
DDX56-203ENST00000421223 SDF2L1Q9HCN8 221 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 MIOXQ9UGB7 285 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 YIF1AO95070 293 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 GOSR1O95249 250 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 TRGC2P03986 189 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 APOBEC3AP31941 199 aaPredicted RBP8.93□□□□□ -0.98
DDX56-203ENST00000421223 Q5PR19 223 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 MUC15Q8N387 334 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 GGTLC1Q9BX51 225 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 SEPSECSQ9HD40 501 aaKnown RBP8.93□□□□□ -0.98
DDX56-203ENST00000421223 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 MSRB2Q9Y3D2 182 aa8.93□□□□□ -0.98
DDX56-203ENST00000421223 TEX50A0A1B0GTY4 177 aa8.92□□□□□ -0.98
DDX56-203ENST00000421223 NDUFB4O95168 129 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms