RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 TFF3Q07654 80 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 FAM216BQ8N7L0 139 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 C1orf147Q96MC9 270 aaPredicted RBP12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 SAA2-SAA4A0A096LPE2 208 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 HCP5Q6MZN7 132 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 TRIOBPQ9H2D6 2365 aa12.37□□□□□ -0.43
AP000550.1-201ENST00000420508 Q6AWC8 147 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 C1QL4Q86Z23 238 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 DOCK8Q8NF50 2099 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 EIF3GO75821 320 aaKnown RBP eCLIP12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 Q6ZN92 141 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 GLRX5Q86SX6 157 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 LEAP2Q969E1 77 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 RNF5Q99942 180 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 MAP1BP46821 2468 aaKnown RBP12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 A0A1W2PRE2 83 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 PTTG1IPP53801 180 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 ECSCRQ19T08 205 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 FMC1Q96HJ9 113 aa12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 RPUSD1Q9UJJ7 312 aaKnown RBP12.36□□□□□ -0.43
AP000550.1-201ENST00000420508 ELOVL1Q9BW60 279 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 A0A1W2PRD5 423 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 A0A1W2PRF3 423 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 A0A1W2PRM7 423 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 IGKV3-15P01624 115 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 PNKDQ8N490 385 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 HOXA5P20719 270 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 FXYD3Q14802 87 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 ATRAIDQ6UW56 229 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 EEF1AKMT3Q96AZ1 226 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 PROK2Q9HC23 129 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
AP000550.1-201ENST00000420508 GFRA3O60609 400 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 FOSL1P15407 271 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 CCL20P78556 96 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 HERPUD1Q15011 391 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 PTPRZ1P23471 2315 aaPredicted RBP12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 UNQ5815/PRO19632Q6UWF5 114 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 MBNL3Q9NUK0 354 aaKnown RBP12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 AURKAIP1Q9NWT8 199 aaPredicted RBP12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 IGFBP2P18065 325 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 DPF1Q92782 380 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 CBY1Q9Y3M2 126 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 RPL23P62829 140 aaKnown RBP12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 LINC00305Q7Z4B0 112 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 ZFP30Q9Y2G7 519 aa12.34□□□□□ -0.43
AP000550.1-201ENST00000420508 SAA1P0DJI8 122 aaPredicted RBP12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 HERVK_113P61574 105 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 PVRIGQ6DKI7 326 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 TMEM116Q8NCL8 245 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 LMO1P25800 156 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 SLC35B1P78383 322 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 Q6ZS92 163 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 HSPB9Q9BQS6 159 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 CLEC5AQ9NY25 188 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 PEX7O00628 323 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 CD69Q07108 199 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 SAMD13Q5VXD3 122 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 HEPN1Q6WQI6 88 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 Q6ZSR3 168 aa12.33□□□□□ -0.44
AP000550.1-201ENST00000420508 OR10J6PQ8NGY7 276 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 LY96Q9Y6Y9 160 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 OSTCQ9NRP0 149 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 MOSP00540 346 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 HBBP68871 147 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 GPR82Q96P67 336 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 RP1P56715 2156 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 C1QTNF9BB2RNN3 333 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 GPR61Q9BZJ8 451 aa12.32□□□□□ -0.44
AP000550.1-201ENST00000420508 PLXND1Q9Y4D7 1925 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 C5orf63A6NC05 138 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 A6NDN8 102 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
AP000550.1-201ENST00000420508 ARF6P62330 175 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms