RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 COA4Q9NYJ1 87 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF257Q9Y2Q1 563 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 WSB1Q9Y6I7 421 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 MTORP42345 2549 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 TEX50A0A1B0GTY4 177 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 C7orf66A4D0T2 115 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 HMX3A6NHT5 357 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 L7N2F9 121 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 REG1AP05451 166 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 PF4V1P10720 104 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 SLC25A6P12236 298 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 MYOD1P15172 320 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 MDKP21741 143 aaPredicted RBP6.68□□□□□ -1.34
TRIM48-201ENST00000417545 NKX2-1P43699 371 aaPredicted RBP6.68□□□□□ -1.34
TRIM48-201ENST00000417545 SPCS3P61009 180 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 VAMP2P63027 116 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 CYCSP99999 105 aaKnown RBP6.68□□□□□ -1.34
TRIM48-201ENST00000417545 NDPQ00604 133 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 Q6ZS46 218 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF429Q86V71 674 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 ZBTB8BQ8NAP8 495 aaPredicted RBP6.68□□□□□ -1.34
TRIM48-201ENST00000417545 OR5M8Q8NGP6 311 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 C19orf24Q9BVV8 132 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 PAIP2BQ9ULR5 123 aaKnown RBP6.68□□□□□ -1.34
TRIM48-201ENST00000417545 SVEP1Q4LDE5 3571 aa6.68□□□□□ -1.34
TRIM48-201ENST00000417545 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 A0A0B4J293 547 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 FAM90A26D6RGX4 464 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 G3V318 75 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 RLN2P04090 185 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 IGF1P05019 195 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR13C7P0DN81 318 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 PVALBP20472 110 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 SUB1P53999 127 aaKnown RBP eCLIP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 RRAS2P62070 204 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 RPP30P78346 268 aaKnown RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 TNFRSF9Q07011 255 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 KRTAP24-1Q3LI83 254 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 C12orf54Q6X4T0 127 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 Q8N2B8 174 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR5T1Q8NG75 326 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 LINC01006Q8NI28 216 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 DTD1Q8TEA8 209 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 C2orf50Q96LR7 162 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 SRSF8Q9BRL6 282 aaKnown RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 RBKSQ9H477 322 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 ZFP57Q9NU63 452 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 LSM5Q9Y4Y9 91 aaKnown RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 MXRA5Q9NR99 2828 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 LINC01548A6NM66 108 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 SSSCA1O60232 199 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 SIX6O95475 246 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 IFNA10P01566 189 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 IL6RP08887 468 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 P0C879 139 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 PET100P0DJ07 73 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 IAPPP10997 89 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 TPPP2P59282 170 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 AKIRIN2Q53H80 203 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 CXorf66Q5JRM2 361 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 TEX38Q6PEX7 206 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 Q6ZRM9 215 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF329Q86UD4 541 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 COMMD1Q8N668 190 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR5AU1Q8NGC0 362 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR10W1Q8NGF6 305 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR52E5Q8NH55 327 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 FAM110DQ8TAY7 271 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 OR10C1Q96KK4 312 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 CIB3Q96Q77 187 aaPredicted RBP6.67□□□□□ -1.34
TRIM48-201ENST00000417545 MAGT1Q9H0U3 335 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 NDUFA4L2Q9NRX3 87 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 THYN1Q9P016 225 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 FBXO7Q9Y3I1 522 aa6.67□□□□□ -1.34
TRIM48-201ENST00000417545 TET2Q6N021 2002 aaPredicted RBP6.66□□□□□ -1.34
TRIM48-201ENST00000417545 TEP1Q99973 2627 aaKnown RBP6.66□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM89A2RUT3 159 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 MPTX1A8MV57 137 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 TEX22C9J3V5 150 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 SYNGR2O43760 224 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 FBXO24O75426 580 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 LY86O95711 162 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 TRGV3P03979 118 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 OR8U8P0C7N1 319 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 AREGP15514 252 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 HIST1H1BP16401 226 aaKnown RBP6.66□□□□□ -1.34
TRIM48-201ENST00000417545 PSMB6P28072 239 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 HTR2BP41595 481 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 BCAP31P51572 246 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 RAB11AP62491 216 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 RPL23AP62750 156 aaKnown RBP6.66□□□□□ -1.34
TRIM48-201ENST00000417545 FCN2Q15485 313 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 LRRC37A5PQ49AS3 106 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 AWAT1Q58HT5 328 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 SLC25A24Q6NUK1 477 aa6.66□□□□□ -1.34
TRIM48-201ENST00000417545 NOXA1Q86UR1 476 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms