RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 OR11H12B2RN74 326 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 APOA1P02647 267 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 LPCAT3Q6P1A2 487 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 PLET1Q6UQ28 207 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 DEFB125Q8N687 156 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 UXS1Q8NBZ7 420 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 OR10W1Q8NGF6 305 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 GPX8Q8TED1 209 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 FCAMRQ8WWV6 532 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 MARC2Q969Z3 335 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 WDR89Q96FK6 387 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 FXYD6Q9H0Q3 95 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
PDLIM2-208ENST00000416159 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SNAPC5O75971 98 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SERPINE2P07093 398 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 HLA-DMAP28067 261 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 S100GP29377 79 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 GPR183P32249 361 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 HRH1P35367 487 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 ELLP55199 621 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 TSPAN5P62079 268 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 ZFAND6Q6FIF0 208 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SLC25A24Q6NUK1 477 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SLC16A13Q7RTY0 426 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 FUNDC2Q9BWH2 189 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 HIPK2Q9H2X6 1198 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SRD5A3Q9H8P0 318 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 SCPEP1Q9HB40 452 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 NDUFA4L2Q9NRX3 87 aa13.23□□□□□ -0.29
PDLIM2-208ENST00000416159 KRASP01116 189 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 C8orf88P0DMB2 117 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 G6PCP35575 357 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 NCS1P62166 190 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 ANKRD55Q3KP44 614 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 ZNF585BQ52M93 769 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 LSM10Q969L4 123 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 FAM212BQ9NTI7 297 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 FKBP11Q9NYL4 201 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 MRPL27Q9P0M9 148 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 MLXQ9UH92 298 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 PRNDQ9UKY0 176 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
PDLIM2-208ENST00000416159 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 TGOLN2O43493 480 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 VBP1P61758 197 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 WT1-ASQ06250 92 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 UNQ9165/PRO28630Q6UXU0 137 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 OR1L6Q8NGR2 347 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 HINT2Q9BX68 163 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 ZNF436Q9C0F3 470 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 NSG2Q9Y328 171 aa13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-208ENST00000416159 RCVRNP35243 200 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 PHLDA2Q53GA4 152 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 SNX29P2Q8IUI4 249 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 OR52B4Q8NGK2 314 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 OR5B3Q8NH48 314 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 SELENOKQ9Y6D0 94 aa13.2□□□□□ -0.3
PDLIM2-208ENST00000416159 IGHV3-35A0A0C4DH35 117 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 SCAF4O95104 1147 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 ELK1P19419 428 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 RORCP51449 518 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 UCP3P55916 312 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 SPSB3Q6PJ21 355 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 IL17DQ8TAD2 202 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 BSCL2Q96G97 398 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 RETNQ9HD89 108 aa13.19□□□□□ -0.3
PDLIM2-208ENST00000416159 HPGDSO60760 199 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 MFAP2P55001 183 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 TBC1D26Q86UD7 250 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 SLC38A6Q8IZM9 456 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 TMEM190Q8WZ59 177 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
PDLIM2-208ENST00000416159 LCE6AA0A183 80 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 OR2T8A6NH00 312 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 NDUFA4O00483 81 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 H2BFWTQ7Z2G1 175 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 SCARB1Q8WTV0 552 aa13.17□□□□□ -0.3
PDLIM2-208ENST00000416159 SEC22AQ96IW7 307 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms