RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
ACTB-202ENST00000414620 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
ACTB-202ENST00000414620 LCE6AA0A183 80 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 OR13C7P0DN81 318 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 G6PCP35575 357 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 LPAR6P43657 344 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 TAS2R46P59540 309 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 PHLDA2Q53GA4 152 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 PLET1Q6UQ28 207 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 TSPAN14Q8NG11 270 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 FCAMRQ8WWV6 532 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 BORCS5Q969J3 196 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 RYR2Q92736 4967 aa11.67□□□□□ -0.54
ACTB-202ENST00000414620 TENM2Q9NT68 2774 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 A0A087WXM4 84 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 TEX50A0A1B0GTY4 177 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 KRASP01116 189 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 NAT1P18440 290 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 F2RP25116 425 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 PRSS3P35030 304 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 HRH1P35367 487 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 NCS1P62166 190 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 ZNF585BQ52M93 769 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 DHRS11Q6UWP2 260 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 SLC16A13Q7RTY0 426 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 OR52B4Q8NGK2 314 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 DGCR14Q96DF8 476 aaKnown RBP11.66□□□□□ -0.54
ACTB-202ENST00000414620 SRSF8Q9BRL6 282 aaKnown RBP11.66□□□□□ -0.54
ACTB-202ENST00000414620 THYN1Q9P016 225 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 COMMD3Q9UBI1 195 aa11.66□□□□□ -0.54
ACTB-202ENST00000414620 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 GPR31O00270 319 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 TGOLN2O43493 480 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 MFAP2P55001 183 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 SNX29P2Q8IUI4 249 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 OR6F1Q8NGZ6 308 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 OR51B2Q9Y5P1 312 aa11.65□□□□□ -0.54
ACTB-202ENST00000414620 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 SERPINE2P07093 398 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 PTBP1P26599 531 aaKnown RBP eCLIP11.64□□□□□ -0.551e-8■■■■■ 33.5
ACTB-202ENST00000414620 VBP1P61758 197 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 RNASE12Q5GAN4 147 aaKnown RBP11.64□□□□□ -0.55
ACTB-202ENST00000414620 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
ACTB-202ENST00000414620 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 CMTM1Q8IZ96 169 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 LSM10Q969L4 123 aaKnown RBP11.64□□□□□ -0.55
ACTB-202ENST00000414620 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
ACTB-202ENST00000414620 IGHV3OR16-8A0A075B7F1 116 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 DBX1A6NMT0 343 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 CYB5BO43169 146 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 SNAPC5O75971 98 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 TSPAN5P62079 268 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
ACTB-202ENST00000414620 VN1R17PQ8TDU5 208 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 GPX8Q8TED1 209 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 FUNDC2Q9BWH2 189 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 ZNF436Q9C0F3 470 aaPredicted RBP11.63□□□□□ -0.55
ACTB-202ENST00000414620 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
ACTB-202ENST00000414620 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
ACTB-202ENST00000414620 CSMD3Q7Z407 3707 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 SACSQ9NZJ4 4579 aa11.63□□□□□ -0.55
ACTB-202ENST00000414620 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
ACTB-202ENST00000414620 HPGDSO60760 199 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 FGF2P09038 288 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 C8orf88P0DMB2 117 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 HSD17B13Q7Z5P4 300 aaPredicted RBP11.62□□□□□ -0.55
ACTB-202ENST00000414620 TBC1D26Q86UD7 250 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 SCARB1Q8WTV0 552 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 MARC2Q969Z3 335 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 C20orf24Q9BUV8 137 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 C21orf62Q9NYP8 219 aa11.62□□□□□ -0.55
ACTB-202ENST00000414620 LOC102724200A0A096LPH7 203 aaPredicted RBP11.61□□□□□ -0.55
ACTB-202ENST00000414620 SMIM31A0A1B0GVY4 71 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 ELK1P19419 428 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 RCVRNP35243 200 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 ELLP55199 621 aaPredicted RBP11.61□□□□□ -0.55
ACTB-202ENST00000414620 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 Q56UQ5 140 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 BSCL2Q96G97 398 aaPredicted RBP11.61□□□□□ -0.55
ACTB-202ENST00000414620 LYSTQ99698 3801 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 CHRDL1Q9BU40 450 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
ACTB-202ENST00000414620 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
ACTB-202ENST00000414620 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
ACTB-202ENST00000414620 F8W735 103 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms