RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ISLRO14498 428 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 NPSP0C0P6 89 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 FRMD6-AS1P0C7T7 363 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 TIGITQ495A1 244 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 MIR17HGQ75NE6 70 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 C1orf162Q8NEQ5 155 aaPredicted RBP14.51□□□□□ -0.09
SDCBP-202ENST00000413219 SLC35E1Q96K37 410 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 NRN1Q9NPD7 142 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 CLCF1Q9UBD9 225 aa14.51□□□□□ -0.09
SDCBP-202ENST00000413219 TBL2Q9Y4P3 447 aaKnown RBP14.51□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF253O75346 499 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 CA2P00918 260 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 HLA-DQA1P01909 254 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 IGFBP2P18065 325 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 HOXC12P31275 282 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 ARG2P78540 354 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 RTL8BQ17RB0 113 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 RNFT1Q5M7Z0 435 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 TMEM164Q5U3C3 297 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 MBNL2Q5VZF2 373 aaKnown RBP14.5□□□□□ -0.09
SDCBP-202ENST00000413219 FAM214BQ7L5A3 538 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 FER1L6-AS2Q96M78 137 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 C19orf24Q9BVV8 132 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 MSL2Q9HCI7 577 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 TECRQ9NZ01 308 aaKnown RBP14.5□□□□□ -0.09
SDCBP-202ENST00000413219 SRRM5B3KS81 715 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 AMY1AP04745 511 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF134P52741 427 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 KRTDAPP60985 99 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 PSG5Q15238 335 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 PQLC2Q6ZP29 291 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 PNKDQ8N490 385 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 RNF114Q9Y508 228 aa14.5□□□□□ -0.09
SDCBP-202ENST00000413219 IGKV1D-17A0A075B6S4 117 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF883P0CG24 379 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 CRYBB3P26998 211 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 SUMO1P63165 101 aaKnown RBP14.49□□□□□ -0.09
SDCBP-202ENST00000413219 POU2AF1Q16633 256 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 CYB5R2Q6BCY4 276 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 OR4A47Q6IF82 309 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 PLPPR2Q96GM1 343 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 NABP2Q9BQ15 211 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 NCOR1P1Q9H4R4 102 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 RAB9BQ9NP90 201 aa14.49□□□□□ -0.09
SDCBP-202ENST00000413219 HCFC1P51610 2035 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 A0A1W2PS18 150 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 CFHR2P36980 270 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 AMTP48728 403 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 ATP5IP56385 69 aaPredicted RBP14.48□□□□□ -0.09
SDCBP-202ENST00000413219 GUSBP1Q15486 140 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 FAM103A1Q9BTL3 118 aaKnown RBP14.48□□□□□ -0.09
SDCBP-202ENST00000413219 DUSP13Q9UII6 198 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 SMIM27A0A1W2PRY6 76 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 AGFG2O95081 481 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 FABP6P51161 128 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 ADTRPQ96IZ2 230 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 UQCR10Q9UDW1 63 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 ZFP30Q9Y2G7 519 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 CACNA1DQ01668 2161 aa14.48□□□□□ -0.09
SDCBP-202ENST00000413219 A0A1W2PNU3 283 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-202ENST00000413219 LNP1A1A4G5 178 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF324O75467 553 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-202ENST00000413219 TAS2R45P59539 299 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 MRPS11P82912 194 aaKnown RBP14.47□□□□□ -0.09
SDCBP-202ENST00000413219 SPATA45Q537H7 98 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 C19orf35Q6ZS72 473 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 DOLPP1Q86YN1 238 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 TMEM178AQ8NBL3 297 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 CALYQ9NYX4 217 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 IDI2-AS1Q9NZ38 188 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 CBY1Q9Y3M2 126 aa14.47□□□□□ -0.09
SDCBP-202ENST00000413219 TET2Q6N021 2002 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-202ENST00000413219 A0A1W2PRE2 83 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 ACTL6BO94805 426 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 CECR9P0C854 216 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 CGB3P0DN86 165 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 CGB7P0DN87 165 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 PPOXP50336 477 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 PRRX1P54821 245 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 BATFQ16520 125 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 GCSAMQ8N6F7 178 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF503Q96F45 646 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 RNASE7Q9H1E1 156 aaKnown RBP14.46□□□□□ -0.09
SDCBP-202ENST00000413219 PRNDQ9UKY0 176 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 FZR1Q9UM11 496 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF257Q9Y2Q1 563 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 BMPR1BO00238 502 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 IGLV1-44P01699 117 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 IGLV2-8P01709 118 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 ZNF83P51522 516 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 RASL11AQ6T310 242 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 STARD4Q96DR4 205 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 IGF2BP2-AS1Q96M15 143 aa14.46□□□□□ -0.09
SDCBP-202ENST00000413219 IBA57Q5T440 356 aaKnown RBP14.45□□□□□ -0.1
SDCBP-202ENST00000413219 C1orf229Q6ZS94 237 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-202ENST00000413219 COMMD5Q9GZQ3 224 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 MRPL27Q9P0M9 148 aaKnown RBP14.45□□□□□ -0.1
SDCBP-202ENST00000413219 OR51B2Q9Y5P1 312 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 IZUMO1RA6ND01 250 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms