RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NOTOA8MTQ0 251 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 NDUFA4O00483 81 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ZNF207O43670 478 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 SERPINE2P07093 398 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CTSDP07339 412 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TRAPPC2P0DI81 140 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TRAPPC2BP0DI82 140 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CATR1Q13166 79 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 GDPD1Q8N9F7 314 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 BEST4Q8NFU0 473 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 DMBX1Q8NFW5 382 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 NRG4Q8WWG1 115 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 C6orf62Q9GZU0 229 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 SLC5A7Q9GZV3 580 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TEX50A0A1B0GTY4 177 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 K7EMT4 169 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PPYP01298 95 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 FXYD4P59646 89 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 WT1-ASQ06250 92 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 GVQW1Q8N7I0 195 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CD300LFQ8TDQ1 290 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 RARRES2Q99969 163 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 DAPK2Q9UIK4 370 aa10.49□□□□□ -0.73
HLA-DQB2-229ENST00000411527 MPTX1A8MV57 137 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 IFNA4P05014 189 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ADMP35318 185 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 MFAP2P55001 183 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ZNF124Q15973 351 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 THOC7Q6I9Y2 204 aaKnown RBP10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 OR51H1Q8NH63 302 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 C11orf45Q8TAV5 145 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 LGALS14Q8TCE9 139 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 SCARB1Q8WTV0 552 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 HINT2Q9BX68 163 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 RHBDL2Q9NX52 303 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 FCER2P06734 321 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 FGF2P09038 288 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TFPI2P48307 235 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 Q56UQ5 140 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 AADACL3Q5VUY0 350 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ZNF818PQ6ZRF7 136 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 HOGA1Q86XE5 327 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 RNF2Q99496 336 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 MFFQ9GZY8 342 aa10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TXNL4BQ9NX01 149 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 F11RQ9Y624 299 aaKnown RBP10.47□□□□□ -0.73
HLA-DQB2-229ENST00000411527 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 F8W735 103 aaPredicted RBP10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 FGF9P31371 208 aaPredicted RBP10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PRR20EP86478 221 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PRR20CP86479 221 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PRR20DP86480 221 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PRR20BP86481 221 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 PRR20AP86496 221 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 TMEM17Q86X19 198 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 OR11H2Q8NH07 326 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 CNBD2Q96M20 576 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 COMMD9Q9P000 198 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 BLOC1S6Q9UL45 172 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 ETV7Q9Y603 341 aa10.46□□□□□ -0.73
HLA-DQB2-229ENST00000411527 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IGHV3-49A0A0A0MS15 119 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 IGHV7-4-1A0A0J9YVY3 117 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 K7EIM0 57 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CHEK1O14757 476 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 CTSGP08311 255 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 ERVK-16P61578 105 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 SFXN4Q6P4A7 337 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 C2CD4CQ8TF44 421 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 GIMAP1Q8WWP7 306 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 LSM10Q969L4 123 aaKnown RBP10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
HLA-DQB2-229ENST00000411527 VPS13DQ5THJ4 4388 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms