RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TMEM229BQ8NBD8 167 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 SRSF8Q9BRL6 282 aaKnown RBP14.44□□□□□ -0.1
SF3A1-202ENST00000411423 CCDC59Q9P031 241 aaKnown RBP14.44□□□□□ -0.1
SF3A1-202ENST00000411423 OR51B2Q9Y5P1 312 aa14.44□□□□□ -0.1
SF3A1-202ENST00000411423 H3BMQ9 156 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 GGCTO75223 188 aaKnown RBP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 SERPINE2P07093 398 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 NHLRC4P0CG21 123 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 OR13C7P0DN81 318 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 HIST1H1BP16401 226 aaKnown RBP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 PTBP1P26599 531 aaKnown RBP eCLIP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 ARL3P36405 182 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 PPP5CP53041 499 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 TATDN3Q17R31 274 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 IZUMO4Q1ZYL8 232 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 OR1L8Q8NGR8 309 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 ZNF502Q8TBZ5 544 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 EEF1AKMT3Q96AZ1 226 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 TP53RKQ96S44 253 aa14.43□□□□□ -0.1
SF3A1-202ENST00000411423 SLIRPQ9GZT3 109 aaKnown RBP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 FAM212BQ9NTI7 297 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-202ENST00000411423 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 GABARAPH6UMI1 98 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 DHFRP00374 187 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 IGHV4-30-4P0DP06 118 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 PGAM2P15259 253 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 RPL5P46777 297 aaKnown RBP14.42□□□□□ -0.1
SF3A1-202ENST00000411423 RND3P61587 244 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 ARRDC1Q8N5I2 433 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 GDPD1Q8N9F7 314 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 CACNG8Q8WXS5 425 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 ISOC1Q96CN7 298 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 TMEM14BQ9NUH8 114 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 PEMTQ9UBM1 199 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 U3KQK5 164 aa14.42□□□□□ -0.1
SF3A1-202ENST00000411423 IGHV3-21A0A0B4J1V1 117 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 C15orf61A6NNL5 157 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 IGKV1-5P01602 117 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 IFNA6P05013 189 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 CLEC3BP05452 202 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 PIGPP57054 158 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 CD300EQ496F6 205 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-202ENST00000411423 STEAP1BQ6NZ63 245 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 UNQ9165/PRO28630Q6UXU0 137 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 GPHB5Q86YW7 130 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 BCL7BQ9BQE9 202 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 C19orf73Q9NVV2 129 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 F11RQ9Y624 299 aaKnown RBP14.41□□□□□ -0.1
SF3A1-202ENST00000411423 CEPT1Q9Y6K0 416 aa14.41□□□□□ -0.1
SF3A1-202ENST00000411423 TMEM213A2RRL7 107 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 F8W735 103 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-202ENST00000411423 LGALS9O00182 355 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 SNAPC5O75971 98 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 RAB3DO95716 219 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 P0C879 139 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 FOLR2P14207 255 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 TBPP20226 339 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 GPR183P32249 361 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 TAS2R19P59542 299 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 DEFB114Q30KQ6 69 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 FAM209BQ5JX69 171 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 THOC7Q6I9Y2 204 aaKnown RBP14.4□□□□□ -0.1
SF3A1-202ENST00000411423 SLC25A24Q6NUK1 477 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 OR13C8Q8NGS7 320 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 MARCH1Q8TCQ1 289 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 SMIM4Q8WVI0 70 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 LSM10Q969L4 123 aaKnown RBP14.4□□□□□ -0.1
SF3A1-202ENST00000411423 ZNF414Q96IQ9 312 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 PRNDQ9UKY0 176 aa14.4□□□□□ -0.1
SF3A1-202ENST00000411423 TRBV7-1A0A0A6YYK4 115 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 IGHV3-35A0A0C4DH35 117 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 ZNF785A8K8V0 405 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 H0Y980 276 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 SP6Q3SY56 376 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 SCGB2B2Q4G0G5 96 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 Q8N402 240 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 TERB2Q8NHR7 220 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
SF3A1-202ENST00000411423 DIRAS2Q96HU8 199 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 CXorf58Q96LI9 332 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 WWC2-AS2Q96NR7 200 aa14.39□□□□□ -0.11
SF3A1-202ENST00000411423 DNAH7Q8WXX0 4024 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 A0A0G2JRQ6 117 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 K7EIM0 57 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 CTDSPLO15194 276 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 S100GP29377 79 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 IL18Q14116 193 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 LCN12Q6JVE5 192 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 H2BFWTQ7Z2G1 175 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 OR5B3Q8NH48 314 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 C15orf40Q8WUR7 153 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 SOSTQ9BQB4 213 aa14.38□□□□□ -0.11
SF3A1-202ENST00000411423 C6orf62Q9GZU0 229 aaPredicted RBP14.38□□□□□ -0.11
SF3A1-202ENST00000411423 NXF2Q9GZY0 626 aaKnown RBP14.38□□□□□ -0.11
SF3A1-202ENST00000411423 C3orf85A0A1B0GTC6 90 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 A8MWP6 167 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 A8MZ25 164 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 CBLN1P23435 193 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 MRPS10P82664 201 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms