RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 FOXF2Q12947 444 aa2.58□□□□□ -2
CUL3-204ENST00000409777 EFNB3Q15768 340 aa2.58□□□□□ -2
CUL3-204ENST00000409777 SAPCD1Q5SSQ6 148 aa2.58□□□□□ -2
CUL3-204ENST00000409777 BCL6BQ8N143 479 aaPredicted RBP2.58□□□□□ -2
CUL3-204ENST00000409777 SPEM1Q8N4L4 309 aa2.58□□□□□ -2
CUL3-204ENST00000409777 DEFB119Q8N690 84 aa2.58□□□□□ -2
CUL3-204ENST00000409777 OR5AN1Q8NGI8 311 aa2.58□□□□□ -2
CUL3-204ENST00000409777 MAFAQ8NHW3 353 aaPredicted RBP2.58□□□□□ -2
CUL3-204ENST00000409777 SMIM12Q96EX1 92 aa2.58□□□□□ -2
CUL3-204ENST00000409777 C19orf24Q9BVV8 132 aa2.58□□□□□ -2
CUL3-204ENST00000409777 NRN1Q9NPD7 142 aa2.58□□□□□ -2
CUL3-204ENST00000409777 TMEM14BQ9NUH8 114 aa2.58□□□□□ -2
CUL3-204ENST00000409777 SH3BGRL2Q9UJC5 107 aa2.58□□□□□ -2
CUL3-204ENST00000409777 COX11Q9Y6N1 276 aa2.58□□□□□ -2
CUL3-204ENST00000409777 DSCAML1Q8TD84 2053 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TRAV34A0A0B4J273 112 aa2.57□□□□□ -2
CUL3-204ENST00000409777 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
CUL3-204ENST00000409777 IZUMO1RA6ND01 250 aa2.57□□□□□ -2
CUL3-204ENST00000409777 FAM166BA8MTA8 275 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SIRPB1O00241 398 aa2.57□□□□□ -2
CUL3-204ENST00000409777 MRPL33O75394 65 aaKnown RBP2.57□□□□□ -2
CUL3-204ENST00000409777 HAND1O96004 215 aa2.57□□□□□ -2
CUL3-204ENST00000409777 CA2P00918 260 aa2.57□□□□□ -2
CUL3-204ENST00000409777 P04436 131 aa2.57□□□□□ -2
CUL3-204ENST00000409777 GRPP07492 148 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ADH4P08319 380 aa2.57□□□□□ -2
CUL3-204ENST00000409777 C3orf79P0CE67 100 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TSPOP30536 169 aa2.57□□□□□ -2
CUL3-204ENST00000409777 CFHR2P36980 270 aa2.57□□□□□ -2
CUL3-204ENST00000409777 PPOXP50336 477 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SELENOVP59797 346 aa2.57□□□□□ -2
CUL3-204ENST00000409777 RPL31P62899 125 aaKnown RBP2.57□□□□□ -2
CUL3-204ENST00000409777 UBE2V1Q13404 147 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SSPNQ14714 243 aa2.57□□□□□ -2
CUL3-204ENST00000409777 RTL8BQ17RB0 113 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SPACA3Q8IXA5 215 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF709Q8N972 641 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 MRGPRDQ8TDS7 321 aa2.57□□□□□ -2
CUL3-204ENST00000409777 NEK7Q8TDX7 302 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TSKUQ8WUA8 353 aa2.57□□□□□ -2
CUL3-204ENST00000409777 GALMQ96C23 342 aa2.57□□□□□ -2
CUL3-204ENST00000409777 URB1-AS1Q96HZ7 61 aa2.57□□□□□ -2
CUL3-204ENST00000409777 RCHY1Q96PM5 261 aa2.57□□□□□ -2
CUL3-204ENST00000409777 OR2D2Q9H210 308 aa2.57□□□□□ -2
CUL3-204ENST00000409777 DNAJC4Q9NNZ3 241 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF586Q9NXT0 402 aa2.57□□□□□ -2
CUL3-204ENST00000409777 LAMTOR2Q9Y2Q5 125 aa2.57□□□□□ -2
CUL3-204ENST00000409777 LAMA3Q16787 3333 aa2.57□□□□□ -2
CUL3-204ENST00000409777 A0A1W2PRE2 83 aa2.57□□□□□ -2
CUL3-204ENST00000409777 C15orf61A6NNL5 157 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF785A8K8V0 405 aa2.57□□□□□ -2
CUL3-204ENST00000409777 DIRC3C9JPN6 131 aa2.57□□□□□ -2
CUL3-204ENST00000409777 HSPB6O14558 160 aa2.57□□□□□ -2
CUL3-204ENST00000409777 HMGB3O15347 200 aaKnown RBP2.57□□□□□ -2
CUL3-204ENST00000409777 WDR1O75083 606 aa2.57□□□□□ -2
CUL3-204ENST00000409777 DEFA4P12838 97 aa2.57□□□□□ -2
CUL3-204ENST00000409777 CEACAM3P40198 252 aa2.57□□□□□ -2
CUL3-204ENST00000409777 PMP22Q01453 160 aa2.57□□□□□ -2
CUL3-204ENST00000409777 PLGLB1Q02325 96 aa2.57□□□□□ -2
CUL3-204ENST00000409777 OR5I1Q13606 314 aa2.57□□□□□ -2
CUL3-204ENST00000409777 PMCHL1Q16048 86 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SPATA45Q537H7 98 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF705AQ6ZN79 300 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 ACP7Q6ZNF0 438 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TCF24Q7RTU0 167 aa2.57□□□□□ -2
CUL3-204ENST00000409777 H2BFWTQ7Z2G1 175 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ATP5L2Q7Z4Y8 100 aa2.57□□□□□ -2
CUL3-204ENST00000409777 BATF2Q8N1L9 274 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
CUL3-204ENST00000409777 C18orf32Q8TCD1 76 aa2.57□□□□□ -2
CUL3-204ENST00000409777 RNASE8Q8TDE3 154 aaKnown RBP2.57□□□□□ -2
CUL3-204ENST00000409777 TMEM190Q8WZ59 177 aa2.57□□□□□ -2
CUL3-204ENST00000409777 FAM167A-AS1Q96KT0 104 aa2.57□□□□□ -2
CUL3-204ENST00000409777 FAM173AQ9BQD7 235 aa2.57□□□□□ -2
CUL3-204ENST00000409777 IFI27L2Q9H2X8 130 aa2.57□□□□□ -2
CUL3-204ENST00000409777 DKK4Q9UBT3 224 aa2.57□□□□□ -2
CUL3-204ENST00000409777 JPT1Q9UK76 154 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TRAPPC2LQ9UL33 140 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF257Q9Y2Q1 563 aa2.57□□□□□ -2
CUL3-204ENST00000409777 TRAV9-2A0A087WT02 112 aa2.57□□□□□ -2
CUL3-204ENST00000409777 MBD3L4A6NDZ8 208 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 MBD3L3A6NE82 208 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF705FA8MVS1 300 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 A8MXE2 369 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SLC17A3O00476 420 aa2.57□□□□□ -2
CUL3-204ENST00000409777 FTH1P19P0C7X4 201 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF705DP0CH99 300 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF705BP0CI00 300 aaPredicted RBP2.57□□□□□ -2
CUL3-204ENST00000409777 NPY1RP25929 384 aa2.57□□□□□ -2
CUL3-204ENST00000409777 FOLR3P41439 243 aa2.57□□□□□ -2
CUL3-204ENST00000409777 PAX2Q02962 417 aa2.57□□□□□ -2
CUL3-204ENST00000409777 ZNF90Q03938 601 aa2.57□□□□□ -2
CUL3-204ENST00000409777 MMDQ15546 238 aa2.57□□□□□ -2
CUL3-204ENST00000409777 CLEC12BQ2HXU8 276 aa2.57□□□□□ -2
CUL3-204ENST00000409777 LRRC10Q5BKY1 277 aa2.57□□□□□ -2
CUL3-204ENST00000409777 GDF5OSQ5U4N7 250 aa2.57□□□□□ -2
CUL3-204ENST00000409777 SPATA31B1PQ5VZV4 182 aa2.57□□□□□ -2
CUL3-204ENST00000409777 MIC13Q5XKP0 118 aa2.57□□□□□ -2
CUL3-204ENST00000409777 LEMD1Q68G75 181 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms