RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
SCRN1-203ENST00000409570 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
SCRN1-203ENST00000409570 MRPS7Q9Y2R9 242 aaKnown RBP12.47□□□□□ -0.41
SCRN1-203ENST00000409570 PRELID3BQ9Y3B1 194 aa12.47□□□□□ -0.41
SCRN1-203ENST00000409570 DNAH2Q9P225 4427 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 TRBV7-1A0A0A6YYK4 115 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 TSPAN4O14817 238 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 NOL3O60936 208 aaKnown RBP12.46□□□□□ -0.41
SCRN1-203ENST00000409570 DHFRP00374 187 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 IGLV2-14P01704 120 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 APOA1P02647 267 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 MYOD1P15172 320 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
SCRN1-203ENST00000409570 MAS1LP35410 378 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 CNIH2Q6PI25 160 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 NUDCD2Q8WVJ2 157 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 NAA50Q9GZZ1 169 aaKnown RBP12.46□□□□□ -0.41
SCRN1-203ENST00000409570 MAP6D1Q9H9H5 199 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 RBMX2Q9Y388 322 aaKnown RBP12.46□□□□□ -0.41
SCRN1-203ENST00000409570 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
SCRN1-203ENST00000409570 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 REG1AP05451 166 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 ZNF182P17025 639 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-203ENST00000409570 GPR183P32249 361 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 BRWD1-AS2P59051 145 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 NANOS2P60321 138 aaKnown RBP12.45□□□□□ -0.42
SCRN1-203ENST00000409570 TMEM69Q5SWH9 247 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 ZNF436Q9C0F3 470 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-203ENST00000409570 AUNIPQ9H7T9 357 aa12.45□□□□□ -0.42
SCRN1-203ENST00000409570 ELF5Q9UKW6 265 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-203ENST00000409570 HLA-DQB1P01920 261 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
SCRN1-203ENST00000409570 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 ANXA10Q9UJ72 324 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 OR2W1Q9Y3N9 320 aa12.44□□□□□ -0.42
SCRN1-203ENST00000409570 DYNC1H1Q14204 4646 aaKnown RBP12.43□□□□□ -0.42
SCRN1-203ENST00000409570 IGKV1D-13A0A0B4J2D9 117 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 SSX5O60225 188 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 SLC22A5O76082 557 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 IGKV1-13P0DP09 117 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 DEFA4P12838 97 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
SCRN1-203ENST00000409570 PLET1Q6UQ28 207 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 TMEM190Q8WZ59 177 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 FBXL17Q9UF56 701 aa12.43□□□□□ -0.42
SCRN1-203ENST00000409570 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
SCRN1-203ENST00000409570 TAS2R20P59543 309 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 ARPC4P59998 168 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 RPL8P62917 257 aaKnown RBP12.42□□□□□ -0.42
SCRN1-203ENST00000409570 RBMS2Q15434 407 aaKnown RBP12.42□□□□□ -0.42
SCRN1-203ENST00000409570 LAMTOR1Q6IAA8 161 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 SSX9Q7RTT3 188 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 OR5B3Q8NH48 314 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 C15orf40Q8WUR7 153 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
SCRN1-203ENST00000409570 HSD17B10Q99714 261 aaKnown RBP12.42□□□□□ -0.42
SCRN1-203ENST00000409570 TGOLN2O43493 480 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 IFNA4P05014 189 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 EIF4EP06730 217 aaKnown RBP12.41□□□□□ -0.42
SCRN1-203ENST00000409570 RPA2P15927 270 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 HLA-GP17693 338 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 PRSS3P35030 304 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 RARRES2Q99969 163 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 MFFQ9GZY8 342 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 C11orf68Q9H3H3 251 aaKnown RBP12.41□□□□□ -0.42
SCRN1-203ENST00000409570 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
SCRN1-203ENST00000409570 IGLC7A0M8Q6 106 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 OR4C46A6NHA9 309 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 PTBP1P26599 531 aaKnown RBP eCLIP12.4□□□□□ -0.425e-10■■■■□ 23.5
SCRN1-203ENST00000409570 OR2B8PP59922 312 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 ZNF124Q15973 351 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 APRG1Q8IVJ8 170 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 MFSD4AQ8N468 514 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 C2CD4CQ8TF44 421 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 GPHA2Q96T91 129 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 CSTL1Q9H114 145 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
SCRN1-203ENST00000409570 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
SCRN1-203ENST00000409570 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.42
SCRN1-203ENST00000409570 FAM25AB3EWG3 89 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 FAM25CB3EWG5 89 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 FAM25GB3EWG6 89 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 SULT1C2O00338 296 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 HPGDSO60760 199 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 HRASP01112 189 aa12.39□□□□□ -0.43
SCRN1-203ENST00000409570 CTSDP07339 412 aaPredicted RBP12.39□□□□□ -0.43
SCRN1-203ENST00000409570 ELK1P19419 428 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms