RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SCPEP1Q9HB40 452 aa11.58□□□□□ -0.56
TPM1-207ENST00000403994 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
TPM1-207ENST00000403994 TPPPO94811 219 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 TRAPPC2P0DI81 140 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 TRAPPC2BP0DI82 140 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 CBLN1P23435 193 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 RCVRNP35243 200 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 G6PCP35575 357 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 GUCA2BQ16661 112 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 FAM106AQ4KMX7 169 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 UNQ9165/PRO28630Q6UXU0 137 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 SNX29P2Q8IUI4 249 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 TMEM61Q8N0U2 210 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 OR6F1Q8NGZ6 308 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 CMTM3Q96MX0 182 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 RETNQ9HD89 108 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 MLXQ9UH92 298 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 SELENOKQ9Y6D0 94 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
TPM1-207ENST00000403994 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 KRASP01116 189 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 CLEC3BP05452 202 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 SERPINE2P07093 398 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 SMIM18P0DKX4 95 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 OR13C7P0DN81 318 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 ELK1P19419 428 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 LPAR6P43657 344 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 LINC00322Q6ZN03 302 aaPredicted RBP11.56□□□□□ -0.56
TPM1-207ENST00000403994 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
TPM1-207ENST00000403994 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 LSM10Q969L4 123 aaKnown RBP11.56□□□□□ -0.56
TPM1-207ENST00000403994 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 THYN1Q9P016 225 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
TPM1-207ENST00000403994 IGHV3-35A0A0C4DH35 117 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 SMIM31A0A1B0GVY4 71 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 HPGDSO60760 199 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.567e-7■■■□□ 17
TPM1-207ENST00000403994 MFAP2P55001 183 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 ZNF57Q68EA5 555 aaPredicted RBP11.55□□□□□ -0.56
TPM1-207ENST00000403994 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 CADM3Q8N126 398 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 NAA50Q9GZZ1 169 aaKnown RBP11.55□□□□□ -0.56
TPM1-207ENST00000403994 SRD5A3Q9H8P0 318 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 OR51B2Q9Y5P1 312 aa11.55□□□□□ -0.56
TPM1-207ENST00000403994 F11RQ9Y624 299 aaKnown RBP11.55□□□□□ -0.56
TPM1-207ENST00000403994 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
TPM1-207ENST00000403994 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
TPM1-207ENST00000403994 C15orf61A6NNL5 157 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 CYB5BO43169 146 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 TGOLN2O43493 480 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 GABARAPO95166 117 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
TPM1-207ENST00000403994 TSPAN5P62079 268 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 TBC1D26Q86UD7 250 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 UXS1Q8NBZ7 420 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 ZNF436Q9C0F3 470 aaPredicted RBP11.54□□□□□ -0.56
TPM1-207ENST00000403994 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
TPM1-207ENST00000403994 TMEM14BQ9NUH8 114 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 PRNDQ9UKY0 176 aa11.54□□□□□ -0.56
TPM1-207ENST00000403994 OR2T8A6NH00 312 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 M0QYG6 137 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 SNAPC5O75971 98 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 S100GP29377 79 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 RORCP51449 518 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 CTF1Q16619 201 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
TPM1-207ENST00000403994 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 OR5B3Q8NH48 314 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 MARC2Q969Z3 335 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
TPM1-207ENST00000403994 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 DNAH1Q9P2D7 4330 aa11.53□□□□□ -0.56
TPM1-207ENST00000403994 F8W735 103 aaPredicted RBP11.52□□□□□ -0.57
TPM1-207ENST00000403994 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
TPM1-207ENST00000403994 IGKV1-39P01597 117 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 IGKV1D-39P04432 117 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 IFNA6P05013 189 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 UCP3P55916 312 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 SLC25A24Q6NUK1 477 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 SEC22AQ96IW7 307 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 TSC22D3Q99576 134 aa11.52□□□□□ -0.57
TPM1-207ENST00000403994 UFC1Q9Y3C8 167 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms