RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RAB7AP51149 207 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 LOXL3P58215 753 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 FAM3BP58499 235 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PDZD11Q5EBL8 140 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 NECAP1Q8NC96 275 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 HEYLQ9NQ87 328 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 KCNIP2Q9NS61 270 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 A0A1W2PPV4 95 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 FABP4P15090 132 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TMEM183AQ8IXX5 376 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GCSAMQ8N6F7 178 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 Q8TCH9 128 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 MEGF10Q96KG7 1140 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GFOD1Q9NXC2 390 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
CHRFAM7A-203ENST00000401522 SPRY3O43610 288 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GGCTO75223 188 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CD99P14209 185 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 HIST1H1BP16401 226 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PPOXP50336 477 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RELBQ01201 579 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RPL39P5Q59GN2 51 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR4S2Q8NH73 311 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR2V2Q96R30 315 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 HIST1H2BLQ99880 126 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 DYNLRB1Q9NP97 96 aa13.04□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PRSS46E5RG02 174 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TMPRSS2O15393 492 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GATCO43716 136 aaKnown RBP13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TYMSP04818 313 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 EDDM3BP56851 147 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 KCNIP4Q6PIL6 250 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR2T10Q8NGZ9 312 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IGFBPL1Q8WX77 278 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 DDB2Q92466 427 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TMEM140Q9NV12 185 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 IL19Q9UHD0 177 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 USF3Q68DE3 2245 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TRAV38-1A0A0B4J264 116 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 RRHO14718 337 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 LHBP01229 141 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 NPPCP23582 126 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 MOGAT3Q86VF5 341 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ZCCHC24Q8N2G6 241 aaKnown RBP13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 BTF3L4Q96K17 158 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PCGF1Q9BSM1 259 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ELOVL1Q9BW60 279 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 FAM234AQ9H0X4 552 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ARFGEF3Q5TH69 2177 aa13.03□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CGB3P0DN86 165 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CGB7P0DN87 165 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 DEFA4P12838 97 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TNFSF4P23510 183 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 ZNF134P52741 427 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GNB1P62873 340 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GCSAMLQ5JQS6 135 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 CST9LP1Q5W188 147 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 OR1P1Q8NH06 330 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 MGST2Q99735 147 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 GGTLC1Q9BX51 225 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 TCF19Q9Y242 345 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PXMP4Q9Y6I8 212 aa13.02□□□□□ -0.32
CHRFAM7A-203ENST00000401522 PTPN13Q12923 2485 aa13.02□□□□□ -0.33
CHRFAM7A-203ENST00000401522 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 CXorf1O96002 111 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 LCN2P80188 198 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 TNFAIP6P98066 277 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 ACTL10Q5JWF8 245 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 CDPF1Q6NVV7 123 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 LINC01551Q86U37 167 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 ZNRF1Q8ND25 227 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 IMMP2LQ96T52 175 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 OVOL3O00110 214 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 STAG3L3P0CL85 134 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 GATA4P43694 442 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 ATP5G3P48201 142 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 THBS3P49746 956 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 RNASEH2CQ8TDP1 164 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 ADTRPQ96IZ2 230 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 FOXA2Q9Y261 457 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 CENPEQ02224 2701 aa13.01□□□□□ -0.33
CHRFAM7A-203ENST00000401522 DSCAMO60469 2012 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms