RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 BRWD3Q6RI45 1802 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 TRAV40A0A0B4J280 105 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 EGR4Q05215 589 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 SRSF6Q13247 344 aaKnown RBP11.61□□□□□ -0.55
VAPA-202ENST00000400000 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 Q96M66 194 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
VAPA-202ENST00000400000 RALGAPA1Q6GYQ0 2036 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 NPIPB4C9JG80 1138 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 TEX29Q8N6K0 151 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 CDX1P47902 265 aaPredicted RBP11.61□□□□□ -0.55
VAPA-202ENST00000400000 IFITM3Q01628 133 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 ZNF146Q15072 292 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 FER1L5A0AVI2 2057 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 HLA-DRB1P01911 266 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 ERGP11308 486 aa11.61□□□□□ -0.55
VAPA-202ENST00000400000 GCM2O75603 506 aaPredicted RBP11.6□□□□□ -0.55
VAPA-202ENST00000400000 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
VAPA-202ENST00000400000 TMEM187Q14656 261 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 SEC16AO15027 2179 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 K7ERU9 68 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 REC114Q7Z4M0 266 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 PKIBQ9C010 78 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 KLRD1Q13241 179 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 COX19Q49B96 90 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 TRBV5-5A0A0J9YX44 114 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 PTGDSP41222 190 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 TCF24Q7RTU0 167 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
VAPA-202ENST00000400000 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 CHCHD2Q9Y6H1 151 aaPredicted RBP11.6□□□□□ -0.55
VAPA-202ENST00000400000 H2BFSP57053 126 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 DPM3Q9P2X0 92 aa11.6□□□□□ -0.55
VAPA-202ENST00000400000 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 FOLR2P14207 255 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 PMCHL1Q16048 86 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 ATP5G3P48201 142 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 EFNB1P98172 346 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 METRNQ9UJH8 293 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 FSTP19883 344 aa11.59□□□□□ -0.55
VAPA-202ENST00000400000 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
VAPA-202ENST00000400000 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.55
VAPA-202ENST00000400000 NAT1P18440 290 aa11.58□□□□□ -0.55
VAPA-202ENST00000400000 TIMM23BQ5SRD1 257 aa11.58□□□□□ -0.55
VAPA-202ENST00000400000 PUSL1Q8N0Z8 303 aaKnown RBP11.58□□□□□ -0.55
VAPA-202ENST00000400000 FAM89BQ8N5H3 189 aa11.58□□□□□ -0.55
VAPA-202ENST00000400000 PARD6GQ9BYG4 376 aaPredicted RBP11.58□□□□□ -0.55
VAPA-202ENST00000400000 A0A1W2PR77 199 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
VAPA-202ENST00000400000 CDC42EP3Q9UKI2 254 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 NBEAP1P0C6P0 100 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 PSG7Q13046 419 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 PRELID3AQ96N28 172 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 VGLL1Q99990 258 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 C21orf62Q9NYP8 219 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
VAPA-202ENST00000400000 JMJD8Q96S16 334 aa11.58□□□□□ -0.56
VAPA-202ENST00000400000 UMODP07911 640 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 CD55P08174 381 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
VAPA-202ENST00000400000 TMEM42Q69YG0 159 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 M0QZK8 103 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 SAP30O75446 220 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 NPIPB8E9PQR5 432 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 NPIPB7O75200 414 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
VAPA-202ENST00000400000 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 JOSD1Q15040 202 aaPredicted RBP11.57□□□□□ -0.56
VAPA-202ENST00000400000 SLC25A34Q6PIV7 304 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 ASCL2Q99929 193 aa11.57□□□□□ -0.56
VAPA-202ENST00000400000 GREM1O60565 184 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 ZNF345Q14585 488 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 ZNF414Q96IQ9 312 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 Q9H3A6 140 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 C8orf46Q8TAG6 207 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
VAPA-202ENST00000400000 SDF2L1Q9HCN8 221 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 IFNL4K9M1U5 179 aa11.56□□□□□ -0.56
VAPA-202ENST00000400000 LY75O60449 1722 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms