RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 PLAUP00749 431 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 CCL20P78556 96 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 FAM89BQ8N5H3 189 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 DCTN5Q9BTE1 182 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 FAM181BA6NEQ2 426 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 FGF16O43320 207 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 ZIC3O60481 467 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 PPBPP02775 128 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 TRGV3P03979 118 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 MDKP21741 143 aaPredicted RBP7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 TFF3Q07654 80 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 ORMDL3Q8N138 153 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 C21orf62Q9NYP8 219 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 RNF222A6NCQ9 220 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 DUSP14O95147 198 aaKnown RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 MYOD1P15172 320 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 BIVMQ86UB2 503 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 FER1L6-AS1Q8NA97 138 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 Q9H3A6 140 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 FOXI3A8MTJ6 420 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 LYPD3O95274 346 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 IGFBP2P18065 325 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 NUP37Q8NFH4 326 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 FBXL7Q9UJT9 491 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 A0A1B0GV72 72 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 APOHP02749 345 aaPredicted RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 CECR9P0C854 216 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 TBL2Q9Y4P3 447 aaKnown RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 ZSWIM8A7E2V4 1837 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 A0A1W2PRE2 83 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 REG1AP05451 166 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 ICAM4Q14773 271 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 WDR82Q6UXN9 313 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 BEND2Q8NDZ0 799 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 IMMP1LQ96LU5 166 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 SEMA5BQ9P283 1151 aa7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 XIRP1Q702N8 1843 aaKnown RBP7.04□□□□□ -1.28
SPTLC3-201ENST00000399002 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 CGAP01215 116 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 TFPI2P48307 235 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 MBNL2Q5VZF2 373 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 SMPXQ9UHP9 88 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 BRWD3Q6RI45 1802 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 MRPL16Q9NX20 251 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 TCRBV4S1A1TA0A5B7 111 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 C17orf98A8MV24 154 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 ATP5J2P56134 94 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 TGIF1Q15583 401 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 CENPVQ7Z7K6 275 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 PRR19A6NJB7 356 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 IGHV1-2P23083 117 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 BTCP35070 178 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 MESP2Q0VG99 397 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 VKORC1L1Q8N0U8 176 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 OR13A1Q8NGR1 328 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 MBD3L1Q8WWY6 194 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 NBR2O15453 112 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 TSPAN13O95857 204 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 TYMSP04818 313 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 CBLN1P23435 193 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 ZXDCQ2QGD7 858 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 EAF1Q96JC9 268 aaPredicted RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 RNF5Q99942 180 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 CBLN4Q9NTU7 201 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 ZFC3H1O60293 1989 aaKnown RBP7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 SIP14410 1827 aa7.03□□□□□ -1.28
SPTLC3-201ENST00000399002 H7C2G1 150 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 EFEMP2O95967 443 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 CD5P06127 495 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 CEACAM1P13688 526 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 LHX2P50458 406 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 DSCR9P59020 149 aa7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.28
SPTLC3-201ENST00000399002 TRGV11A0A075B6L2 103 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 F2Z2F3 143 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKV1D-33P01593 117 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKV1-33P01594 117 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 PRCDQ00LT1 54 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 ZNF324BQ6AW86 544 aaPredicted RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 C10orf126Q8N4M7 172 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 MRPL20Q9BYC9 149 aaKnown RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 LY96Q9Y6Y9 160 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 MCM3APO60318 1980 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 ORMDL2Q53FV1 153 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 NR2C2APQ86WQ0 139 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 CLDN16Q9Y5I7 305 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 GRIFINA4D1Z8 144 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms