RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 LY6HO94772 140 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 IGLV1-47P01700 117 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 OPN1MWP04001 364 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 OPN1MW2P0DN77 364 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 OPN1MW3P0DN78 364 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 GNLYP22749 145 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 CDC34P49427 236 aaPredicted RBP20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 VMA21Q3ZAQ7 101 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 MGST2Q99735 147 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 C20orf24Q9BUV8 137 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 LSM4Q9Y4Z0 139 aaKnown RBP20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 SEC14L6B5MCN3 397 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 LIPFP07098 398 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 UQCRFS1P47985 274 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 C2orf83Q53S99 150 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 ARSJQ5FYB0 599 aaPredicted RBP20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 LY6G5BQ8NDX9 201 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 GGTLC1Q9BX51 225 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 CHODLQ9H9P2 273 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 NDUFA4L2Q9NRX3 87 aa20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 AMMECR1Q9Y4X0 333 aaPredicted RBP20.87■□□□□ 0.93
SHARPIN-202ENST00000398712 H3BQ15 152 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 IGLV2-23P01705 113 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 LGALS7P47929 136 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 RAB31Q13636 194 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 TEPPQ6URK8 271 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 NIPSNAP3BQ9BS92 247 aa20.86■□□□□ 0.93
SHARPIN-202ENST00000398712 SMG1Q96Q15 3661 aaKnown RBP20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 A0A1W2PN81 502 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 INS-IGF2F8WCM5 200 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 PAX6P26367 422 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 CHRNA7P36544 502 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 BSXQ3C1V8 233 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 MANBALQ9NQG1 85 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 PXMP4Q9Y6I8 212 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 ZFYVE26Q68DK2 2539 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 AKR1C3P42330 323 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 PSMB3P49720 205 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 ERHP84090 104 aaKnown RBP20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 C15orf54Q8N8G6 183 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 TUBA4BQ9H853 241 aa20.85■□□□□ 0.93
SHARPIN-202ENST00000398712 BUB1B-PAK6H3BSN5 160 aa20.84■□□□□ 0.93
SHARPIN-202ENST00000398712 HMGB3O15347 200 aaKnown RBP20.84■□□□□ 0.93
SHARPIN-202ENST00000398712 PATZ1Q9HBE1 687 aaKnown RBP20.84■□□□□ 0.93
SHARPIN-202ENST00000398712 ONECUT1Q9UBC0 465 aa20.84■□□□□ 0.93
SHARPIN-202ENST00000398712 NBASA2RRP1 2371 aa20.83■□□□□ 0.93
SHARPIN-202ENST00000398712 A0A1W2PPV4 95 aa20.83■□□□□ 0.93
SHARPIN-202ENST00000398712 ENSAO43768 121 aaKnown RBP20.83■□□□□ 0.93
SHARPIN-202ENST00000398712 EIF3GO75821 320 aaKnown RBP eCLIP20.83■□□□□ 0.93
SHARPIN-202ENST00000398712 TVP23CQ96ET8 276 aa20.83■□□□□ 0.93
SHARPIN-202ENST00000398712 NDUFS6O75380 124 aaKnown RBP20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 RNASE2P10153 161 aaKnown RBP20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 TMEM249Q2WGJ8 235 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 FAM90A2PQ658T7 463 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 SLC35E3Q7Z769 313 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 ABCA4P78363 2273 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 YIF1AO95070 293 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 COX7A1P24310 79 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 MEF2BQ02080 365 aaPredicted RBP20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 MIC13Q5XKP0 118 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 C1orf159Q96HA4 380 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 TMPRSS5Q9H3S3 457 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 ZNF430Q9H8G1 570 aaPredicted RBP20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 INSIG2Q9Y5U4 225 aa20.82■□□□□ 0.92
SHARPIN-202ENST00000398712 MALRD1Q5VYJ5 2156 aa20.81■□□□□ 0.92
SHARPIN-202ENST00000398712 C22orf46C9J442 243 aa20.81■□□□□ 0.92
SHARPIN-202ENST00000398712 OR10W1Q8NGF6 305 aa20.81■□□□□ 0.92
SHARPIN-202ENST00000398712 IGHV1-3A0A0C4DH29 117 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 A0A1W2PPR1 153 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 COLCA2A8K830 154 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 SLC25A17O43808 307 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 RPL29P47914 159 aaKnown RBP20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 DLX1P56177 255 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 B2MP61769 119 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 IQCF2Q8IXL9 164 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 TEX45Q8NA69 505 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 OR4P4Q8NGL7 312 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 SSBP3Q9BWW4 388 aaPredicted RBP20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 IGSF10Q6WRI0 2623 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 GCSAMLQ5JQS6 135 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 TMEM144Q7Z5S9 345 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 RPEQ96AT9 228 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 UBTD1Q9HAC8 227 aa20.8■□□□□ 0.92
SHARPIN-202ENST00000398712 IGHV3-72A0A0B4J1Y9 119 aa20.79■□□□□ 0.92
SHARPIN-202ENST00000398712 MOB3BQ86TA1 216 aa20.79■□□□□ 0.92
SHARPIN-202ENST00000398712 PNKDQ8N490 385 aa20.79■□□□□ 0.92
SHARPIN-202ENST00000398712 SSMEM1Q8WWF3 244 aa20.79■□□□□ 0.92
SHARPIN-202ENST00000398712 HIVEP3Q5T1R4 2406 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 TNCP24821 2201 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 LOC105371242A0A075B767 164 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 M0R1W7 72 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 CD81P60033 236 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 STPG3Q8N7X2 389 aa20.78■□□□□ 0.92
SHARPIN-202ENST00000398712 DEFA4P12838 97 aa20.77■□□□□ 0.92
SHARPIN-202ENST00000398712 GPR6P46095 362 aaPredicted RBP20.77■□□□□ 0.92
SHARPIN-202ENST00000398712 SUB1P53999 127 aaKnown RBP eCLIP20.77■□□□□ 0.92
SHARPIN-202ENST00000398712 PNRC1Q12796 327 aaPredicted RBP20.77■□□□□ 0.92
SHARPIN-202ENST00000398712 A0A087WWC5 75 aa20.77■□□□□ 0.91
SHARPIN-202ENST00000398712 TMEM250H0YL14 139 aa20.77■□□□□ 0.91
SHARPIN-202ENST00000398712 IGFBP2P18065 325 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms