RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 IL19Q9UHD0 177 aa13.26□□□□□ -0.29
CHMP1A-201ENST00000397901 LINC00473A8K010 186 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 CLDN14O95500 239 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 CA2P00918 260 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 THBS3P49746 956 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 EDDM3BP56851 147 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 OBP2BQ9NPH6 170 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 ABI3Q9P2A4 366 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 NBEAQ8NFP9 2946 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 TRAV9-2A0A087WT02 112 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 NBEAP1P0C6P0 100 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 SSTR5P35346 364 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 TRIP6Q15654 476 aaKnown RBP13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 RPEL1Q2QD12 228 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 WDR73Q6P4I2 378 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 Q6ZR03 302 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 ATOH7Q8N100 152 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 OR4P4Q8NGL7 312 aa13.25□□□□□ -0.29
CHMP1A-201ENST00000397901 RAB29O14966 203 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 RHOBP62745 196 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 PSG7Q13046 419 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 LTC4SQ16873 150 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 RCHY1Q96PM5 261 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 TMEM204Q9BSN7 226 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 NDUFS8O00217 210 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 HTD2P86397 168 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 VWC2Q2TAL6 325 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 ZNF766Q5HY98 468 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 C1orf185Q5T7R7 199 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 PLPPR2Q96GM1 343 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 COQ2Q96H96 371 aa13.24□□□□□ -0.29
CHMP1A-201ENST00000397901 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 PRSS47A8MTI9 375 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 SLC17A3O00476 420 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 TAX1BP3O14907 124 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 MPV17P39210 176 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 ARF6P62330 175 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 PSG11Q9UQ72 335 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 MRPL49Q13405 166 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 COX19Q49B96 90 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 LHFPL4Q7Z7J7 247 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 Q8N7P7 452 aa13.23□□□□□ -0.29
CHMP1A-201ENST00000397901 LYZL6O75951 148 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 RAB1CQ92928 201 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 DCTN5Q9BTE1 182 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 KNTC1P50748 2209 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 A0A1W2PPV4 95 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 OR9G9P0C7N8 305 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 FRMD6-AS1P0C7T7 363 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 CD1BP29016 333 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 PRAMEF6Q5VXH4 476 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 SLC35E4Q6ICL7 350 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 ERASQ7Z444 233 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 CLEC7AQ9BXN2 247 aa13.22□□□□□ -0.29
CHMP1A-201ENST00000397901 PRR14LQ5THK1 2151 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 SP1P08047 785 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 HES3Q5TGS1 186 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 ST6GALNAC3Q8NDV1 305 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 TSKUQ8WUA8 353 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 TNFRSF14Q92956 283 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 FAM234AQ9H0X4 552 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 HES4Q9HCC6 221 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 SPRR3Q9UBC9 169 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 FZR1Q9UM11 496 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 WDR83OSQ9Y284 106 aa13.21□□□□□ -0.29
CHMP1A-201ENST00000397901 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 H0YJW9 148 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 TNFSF15O95150 251 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 IGLL1P15814 213 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 GABRA6Q16445 453 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 K7EN84 100 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 CORTO00230 105 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 FAM71F2Q6NXP2 309 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 TMEM136Q6ZRR5 245 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 FAM19A2Q8N3H0 131 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 LY96Q9Y6Y9 160 aa13.2□□□□□ -0.3
CHMP1A-201ENST00000397901 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
CHMP1A-201ENST00000397901 J3QR06 171 aa13.19□□□□□ -0.3
CHMP1A-201ENST00000397901 FCGR3BO75015 233 aa13.19□□□□□ -0.3
CHMP1A-201ENST00000397901 ARL14EPLP0DKL9 152 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms