RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 Q8TCH9 128 aa8.6□□□□□ -1.03
CPSF1P1-201ENST00000397477 SCNM1Q9BWG6 230 aa8.6□□□□□ -1.03
CPSF1P1-201ENST00000397477 SFXN3Q9BWM7 321 aa8.6□□□□□ -1.03
CPSF1P1-201ENST00000397477 SEPSECSQ9HD40 501 aaKnown RBP8.6□□□□□ -1.03
CPSF1P1-201ENST00000397477 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 METTL1Q9UBP6 276 aaKnown RBP8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 CACNA1AO00555 2505 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 H3BTX0 84 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 IL6RP08887 468 aaPredicted RBP8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 PAX6P26367 422 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 RELBQ01201 579 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 ASPHD1Q5U4P2 390 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 SGMS2Q8NHU3 365 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 UHRF2Q96PU4 802 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 B4DEV8 164 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 SLC25A17O43808 307 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 LY6HO94772 140 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 FOLR2P14207 255 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 ERVFC1-1P60608 527 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 MGST2Q99735 147 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
CPSF1P1-201ENST00000397477 A0A1B0GW64 132 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 SLC17A3O00476 420 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 UBE2CO00762 179 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 GFRA3O60609 400 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 SOD3P08294 240 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 ORM2P19652 201 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 SUMO1P63165 101 aaKnown RBP8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 DIAPH2-AS1Q14236 149 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 C17orf58Q2M2W7 97 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 PRR31Q5SQ13 230 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 IGFL2Q6UWQ7 119 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 MIR17HGQ75NE6 70 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 GAFA1Q96PS6 74 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 P2RX4Q99571 388 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 WDR83OSQ9Y284 106 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 NAV3Q8IVL0 2385 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 CASP6P55212 293 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 LOXL3P58215 753 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 RHOBP62745 196 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 TCF15Q12870 199 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 KRTCAP3Q53RY4 240 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 OR2T6Q8NHC8 308 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 BLNKQ8WV28 456 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 FLYWCH2Q96CP2 140 aaKnown RBP8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 SLC35E1Q96K37 410 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 TRAV1-1A0A0B4J248 108 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 C17orf100A8MU93 164 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 RBPJQ06330 500 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 GUSBP1Q15486 140 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 OR9G1Q8NH87 305 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 TUBG2Q9NRH3 451 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.04
CPSF1P1-201ENST00000397477 GATCO43716 136 aaKnown RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 OR5I1Q13606 314 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TCF23Q7RTU1 214 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 IGFBPL1Q8WX77 278 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 NGBQ9NPG2 151 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TIMM8BQ9Y5J9 83 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 HCFC1P51610 2035 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 CRYBB3P26998 211 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 FXYD3Q14802 87 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TCTEX1D1Q8N7M0 179 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TIMM9Q9Y5J7 89 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 SRRM4A7MD48 611 aaKnown RBP8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 SEC14L6B5MCN3 397 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 KIR2DS2P43631 304 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 GNB2P62879 340 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 HES1Q14469 280 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 ADIPOQQ15848 244 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TNXAQ16473 311 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 TGIF2LXQ8IUE1 241 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 OR4X1Q8NH49 305 aa8.57□□□□□ -1.04
CPSF1P1-201ENST00000397477 A0A087WWC5 75 aa8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 GRIFINA4D1Z8 144 aa8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 C15orf61A6NNL5 157 aa8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 PPIHO43447 177 aaKnown RBP8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 CXorf1O96002 111 aa8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
CPSF1P1-201ENST00000397477 C19orf35Q6ZS72 473 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms