RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SIX6O95475 246 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 CRIP2P52943 208 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 SPCS3P61009 180 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 TMEM267Q0VDI3 215 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 ZBTB8BQ8NAP8 495 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 OR5M8Q8NGP6 311 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 OR52E5Q8NH55 327 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 GSKIPQ9P0R6 139 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 ATRQ13535 2644 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 G3V318 75 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 MDKP21741 143 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 PRCDQ00LT1 54 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 OR10W1Q8NGF6 305 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 TMEM158Q8WZ71 300 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 C2orf50Q96LR7 162 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 CACFD1Q9UGQ2 172 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 ZNF580Q9UK33 172 aa18.56■□□□□ 0.56
TSPAN4-203ENST00000397397 CLPSL1A2RUU4 121 aa18.55■□□□□ 0.56
TSPAN4-203ENST00000397397 FCN2Q15485 313 aa18.55■□□□□ 0.56
TSPAN4-203ENST00000397397 AKIRIN2Q53H80 203 aa18.55■□□□□ 0.56
TSPAN4-203ENST00000397397 OR4D5Q8NGN0 318 aa18.55■□□□□ 0.56
TSPAN4-203ENST00000397397 PLEKHA3Q9HB20 300 aa18.55■□□□□ 0.56
TSPAN4-203ENST00000397397 RRAS2P62070 204 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 TNFRSF9Q07011 255 aa18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 CXorf66Q5JRM2 361 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 ASPHD1Q5U4P2 390 aa18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 TMEM68Q96MH6 324 aa18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 SRSF8Q9BRL6 282 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 HSPB7Q9UBY9 170 aa18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 RNF114Q9Y508 228 aa18.54■□□□□ 0.56
TSPAN4-203ENST00000397397 A0A1W2PN81 502 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 CEBPZOSA8MTT3 80 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 FAM90A26D6RGX4 464 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 AREGP15514 252 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 CHRNA7P36544 502 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 HOXA1P49639 335 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 FOXL1Q12952 345 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 CENPVQ7Z7K6 275 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 GON7Q9BXV9 100 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 WNT10AQ9GZT5 417 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 RBKSQ9H477 322 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 ENY2Q9NPA8 101 aa18.53■□□□□ 0.56
TSPAN4-203ENST00000397397 A0A1B0GUS0 222 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 IGLC7A0M8Q6 106 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 TMEM89A2RUT3 159 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 PSMB11A5LHX3 300 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 SCGB1D2O95969 90 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 NKX2-1P43699 371 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 SLC35B1P78383 322 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 PDLIM3Q53GG5 364 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 C19orf54Q5BKX5 351 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 MRPL41Q8IXM3 137 aaKnown RBP18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 KLHDC1Q8N7A1 406 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 OR5T1Q8NG75 326 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 C19orf24Q9BVV8 132 aa18.52■□□□□ 0.56
TSPAN4-203ENST00000397397 HAX1O00165 279 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 REG1AP05451 166 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 OR13C7P0DN81 318 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 WT1-ASQ06250 92 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 HSD17B13Q7Z5P4 300 aaPredicted RBP18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 ZNF329Q86UD4 541 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 MAGT1Q9H0U3 335 aa18.51■□□□□ 0.55
TSPAN4-203ENST00000397397 MED6O75586 246 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 CXCL3P19876 107 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 PSMB6P28072 239 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 H2BFSP57053 126 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 ID3Q02535 119 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 CFHR3Q02985 330 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 TTC9CQ8N5M4 171 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 OR11H7Q8NGC8 314 aa18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 FAM110DQ8TAY7 271 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-203ENST00000397397 WRBO00258 174 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 PPIFP30405 207 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 PROK1P58294 105 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 ERHP84090 104 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 C10orf99Q6UWK7 81 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 HEYLQ9NQ87 328 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 COL6A5A8TX70 2615 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 hCG_2014768A0A024R1R8 64 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 NPIPB5A8MRT5 1133 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 POLR2GP62487 172 aaKnown RBP eCLIP18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 CYCSP99999 105 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 OR2C3Q8N628 320 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 SPATA3Q8NHX4 192 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 DTD1Q8TEA8 209 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 NMES1Q9C002 83 aa18.49■□□□□ 0.55
TSPAN4-203ENST00000397397 INS-IGF2F8WCM5 200 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 SYNGR2O43760 224 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 SOX15O60248 233 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 MBPP02686 304 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 IAPPP10997 89 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 CTRB1P17538 263 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 CTRB2Q6GPI1 263 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 C11orf87Q6NUJ2 197 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 C19orf35Q6ZS72 473 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 WDR89Q96FK6 387 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 HIPK2Q9H2X6 1198 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 ZNF355PQ9NSJ1 428 aa18.48■□□□□ 0.55
TSPAN4-203ENST00000397397 FBXO24O75426 580 aa18.47■□□□□ 0.55
TSPAN4-203ENST00000397397 CRYGCP07315 174 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms