RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LINC00205P59089 165 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 CX3CL1P78423 397 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 TMEM267Q0VDI3 215 aaPredicted RBP11.39□□□□□ -0.59
SEC13-208ENST00000397109 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 PRSS54Q6PEW0 395 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 C8orf86Q6ZUL3 223 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 REC114Q7Z4M0 266 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 TCTEX1D1Q8N7M0 179 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 GPR61Q9BZJ8 451 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
SEC13-208ENST00000397109 METTL1Q9UBP6 276 aaKnown RBP11.39□□□□□ -0.59
SEC13-208ENST00000397109 H0Y980 276 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ADAP1O75689 374 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 CDS2O95674 445 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 IGLL1P15814 213 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 NUP62P37198 522 aaPredicted RBP11.38□□□□□ -0.59
SEC13-208ENST00000397109 EIF4EBP1Q13541 118 aaPredicted RBP11.38□□□□□ -0.59
SEC13-208ENST00000397109 ZNF562Q6V9R5 426 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ETV3LQ6ZN32 361 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 SLC51BQ86UW2 128 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 MRPL41Q8IXM3 137 aaKnown RBP11.38□□□□□ -0.59
SEC13-208ENST00000397109 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 SECTM1Q8WVN6 248 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 SPIN2AQ99865 258 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 SPIN2BQ9BPZ2 258 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ARL6Q9H0F7 186 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 G3V318 75 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 CCL24O00175 119 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 FCN1O00602 326 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 TSC22D2O75157 780 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 HOXB5P09067 269 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 S100A1P23297 94 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 UCP1P25874 307 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 GGNBP1Q5YKI7 109 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ZNF818PQ6ZRF7 136 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 P2RX4Q99571 388 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
SEC13-208ENST00000397109 CCL28Q9NRJ3 127 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
SEC13-208ENST00000397109 UBQLN2Q9UHD9 624 aa11.38□□□□□ -0.59
SEC13-208ENST00000397109 KANTRA0A1W2PQU2 76 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 SLC25A17O43808 307 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 PGLYRP1O75594 196 aaPredicted RBP11.37□□□□□ -0.59
SEC13-208ENST00000397109 IGLV1-40P01703 118 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 F2RP25116 425 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
SEC13-208ENST00000397109 NDPQ00604 133 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 SMCO1Q147U7 214 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 IAH1Q2TAA2 248 aaPredicted RBP11.37□□□□□ -0.59
SEC13-208ENST00000397109 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 LCNL1Q6ZST4 164 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 C4orf3Q8WVX3 66 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 HARBI1Q96MB7 349 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 HSD17B10Q99714 261 aaKnown RBP11.37□□□□□ -0.59
SEC13-208ENST00000397109 RNF126Q9BV68 326 aa11.37□□□□□ -0.59
SEC13-208ENST00000397109 FOXA2Q9Y261 457 aaPredicted RBP11.37□□□□□ -0.59
SEC13-208ENST00000397109 SHOXO15266 292 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 CA2P00918 260 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 SLC25A6P12236 298 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 AKIRIN2Q53H80 203 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 ZNF66Q6ZN08 573 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 DDB2Q92466 427 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 PRELID3BQ9Y3B1 194 aa11.36□□□□□ -0.59
SEC13-208ENST00000397109 A0A1W2PN81 502 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 TAAR5O14804 337 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
SEC13-208ENST00000397109 CHRNA7P36544 502 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 RAB9AP51151 201 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 AP2S1P53680 142 aaPredicted RBP11.35□□□□□ -0.59
SEC13-208ENST00000397109 RAB14P61106 215 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 LRRC37A5PQ49AS3 106 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 RBPMSQ93062 196 aaKnown RBP11.35□□□□□ -0.59
SEC13-208ENST00000397109 PHYHIPLQ96FC7 376 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 PLEKHA2Q9HB19 425 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 MBD2Q9UBB5 411 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 FBXO7Q9Y3I1 522 aa11.35□□□□□ -0.59
SEC13-208ENST00000397109 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
SEC13-208ENST00000397109 LINC00473A8K010 186 aa11.34□□□□□ -0.59
SEC13-208ENST00000397109 BCL2L11O43521 198 aa11.34□□□□□ -0.59
SEC13-208ENST00000397109 CRYGBP07316 175 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms