RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KIR2DL2P43627 348 aaPredicted RBP11.42□□□□□ -0.58
NUP98-204ENST00000397004 TNFSF10P50591 281 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 OR52E5Q8NH55 327 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 GMPPAQ96IJ6 420 aaPredicted RBP11.42□□□□□ -0.58
NUP98-204ENST00000397004 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 FCN1O00602 326 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 CRYBB3P26998 211 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 CT45A3Q8NHU0 189 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 FAM168AQ92567 244 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 MIEN1Q9BRT3 115 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 OPN3Q9H1Y3 402 aaPredicted RBP11.42□□□□□ -0.58
NUP98-204ENST00000397004 ARRDC1-AS1Q9H2J1 176 aa11.42□□□□□ -0.58
NUP98-204ENST00000397004 GGTLC3B5MD39 225 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 SFXN3Q9BWM7 321 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 GNG12Q9UBI6 72 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 KLF13Q9Y2Y9 288 aaPredicted RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 SVILO95425 2214 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 TRGV10A0A0A0MS01 117 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 KLRC4-KLRK1H3BQV0 150 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 CGB3P0DN86 165 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 CGB7P0DN87 165 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 CTRLP40313 264 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 PRR31Q5SQ13 230 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 Q6ZT83 130 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 FAM216AQ8WUB2 273 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 LOXL4Q96JB6 756 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 CACNA1GO43497 2377 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 TIMM8AO60220 97 aaPredicted RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 GPX1P07203 203 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 C17orf58Q2M2W7 97 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 CENPWQ5EE01 88 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 FAM103A1Q9BTL3 118 aaKnown RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 LPAR2Q9HBW0 351 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 SVEP1Q4LDE5 3571 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 ADH4P08319 380 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 Q0VG73 95 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 MRPL49Q13405 166 aaKnown RBP11.41□□□□□ -0.58
NUP98-204ENST00000397004 CR1LQ2VPA4 569 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 LINC00479Q96M42 142 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 ZPBPQ9BS86 351 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 TMEM14BQ9NUH8 114 aa11.41□□□□□ -0.58
NUP98-204ENST00000397004 C15orf61A6NNL5 157 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 SRRM4A7MD48 611 aaKnown RBP11.4□□□□□ -0.58
NUP98-204ENST00000397004 DLEU1O43261 78 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 SPINT2O43291 252 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 MMP23AO75900 390 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 ZNF83P51522 516 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 TCL1AP56279 114 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 C9orf106Q8NAJ2 232 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 LNP1A1A4G5 178 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 C9JCJ5 164 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 WT1P19544 449 aaPredicted RBP11.4□□□□□ -0.58
NUP98-204ENST00000397004 MAJINQ3KP22 176 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 INO80CQ6PI98 192 aaPredicted RBP11.4□□□□□ -0.58
NUP98-204ENST00000397004 IDI2-AS1Q9NZ38 188 aa11.4□□□□□ -0.58
NUP98-204ENST00000397004 SAA2-SAA4A0A096LPE2 208 aa11.4□□□□□ -0.59
NUP98-204ENST00000397004 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.59
NUP98-204ENST00000397004 SAA2P0DJI9 122 aaPredicted RBP11.4□□□□□ -0.59
NUP98-204ENST00000397004 TRIB1Q96RU8 372 aa11.4□□□□□ -0.59
NUP98-204ENST00000397004 IGHV1-18A0A0C4DH31 117 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 A0A1W2PS18 150 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 TPPP2P59282 170 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 CNEP1R1Q8N9A8 125 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 NEUROG1Q92886 237 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 SNRNP40Q96DI7 357 aaKnown RBP11.39□□□□□ -0.59
NUP98-204ENST00000397004 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 C21orf140B9A014 251 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 CDX4O14627 284 aaPredicted RBP11.39□□□□□ -0.59
NUP98-204ENST00000397004 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 OR10J4P0C629 311 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 OR2Z1Q8NG97 314 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 BTF3L4Q96K17 158 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 IGHV2OR16-5A0A0B4J2B6 119 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 TRGV8A0A0C4DH27 118 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 SRRM5B3KS81 715 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 F2RL2O00254 374 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 PSG5Q15238 335 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 NHLRC2Q8NBF2 726 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 SLC24A4Q8NFF2 622 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 ABI3Q9P2A4 366 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 SLC45A2Q9UMX9 530 aa11.39□□□□□ -0.59
NUP98-204ENST00000397004 TBL2Q9Y4P3 447 aaKnown RBP11.39□□□□□ -0.59
NUP98-204ENST00000397004 BMPR1BO00238 502 aa11.38□□□□□ -0.59
NUP98-204ENST00000397004 CD59P13987 128 aa11.38□□□□□ -0.59
NUP98-204ENST00000397004 NPY1RP25929 384 aa11.38□□□□□ -0.59
NUP98-204ENST00000397004 NIT1Q86X76 327 aa11.38□□□□□ -0.59
NUP98-204ENST00000397004 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
NUP98-204ENST00000397004 BAGE2Q86Y30 109 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms