RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SRRM4A7MD48 611 aaKnown RBP12.38□□□□□ -0.43
CLTA-203ENST00000396603 B3GALNT1O75752 331 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 NQO2P16083 231 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 F2RP25116 425 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 PPP5CP53041 499 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 TAS2R31P59538 309 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 RND3P61587 244 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 MRGPRG-AS1Q2M3A8 158 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 SRSF12Q8WXF0 261 aaKnown RBP12.38□□□□□ -0.43
CLTA-203ENST00000396603 SPIN2AQ99865 258 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 SPIN2BQ9BPZ2 258 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 COMMD9Q9P000 198 aa12.38□□□□□ -0.43
CLTA-203ENST00000396603 MSGN1A6NI15 193 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
CLTA-203ENST00000396603 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 KLF9Q13886 244 aaPredicted RBP12.37□□□□□ -0.43
CLTA-203ENST00000396603 ZNF57Q68EA5 555 aaPredicted RBP12.37□□□□□ -0.43
CLTA-203ENST00000396603 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
CLTA-203ENST00000396603 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 OR4A5Q8NH83 315 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 OR2A7Q96R45 310 aa12.37□□□□□ -0.43
CLTA-203ENST00000396603 CENPXA8MT69 81 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 ATG12O94817 140 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 SERPINE2P07093 398 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 SAA1P0DJI8 122 aaPredicted RBP12.36□□□□□ -0.43
CLTA-203ENST00000396603 RPA2P15927 270 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 MAS1LP35410 378 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 PIGPP57054 158 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 TNXAQ16473 311 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 FAAP20Q6NZ36 180 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 IDO2Q6ZQW0 420 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 TBC1D26Q86UD7 250 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 NECAP1Q8NC96 275 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 OR51S1Q8NGJ8 323 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 BIRC6Q9NR09 4857 aa12.36□□□□□ -0.43
CLTA-203ENST00000396603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
CLTA-203ENST00000396603 NAP1L6A6NFF2 107 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 MPPED1O15442 326 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 TRBV12-3P01733 135 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 RHOGP84095 191 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 TTC9CQ8N5M4 171 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 MARCH1Q8TCQ1 289 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
CLTA-203ENST00000396603 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 AKIP1Q9NQ31 210 aa12.35□□□□□ -0.43
CLTA-203ENST00000396603 PIGBOS1A0A0B4J2F0 54 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 BMPR1BO00238 502 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 JTBO76095 146 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 KBTBD11O94819 623 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 S1PR2O95136 353 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 FGF2P09038 288 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
CLTA-203ENST00000396603 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 CADM3Q8N126 398 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 SLC25A21Q9BQT8 299 aaPredicted RBP12.34□□□□□ -0.43
CLTA-203ENST00000396603 CCDC32Q9BV29 185 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
CLTA-203ENST00000396603 HIPK2Q9H2X6 1198 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 BET1LQ9NYM9 111 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 TECRQ9NZ01 308 aaKnown RBP12.34□□□□□ -0.43
CLTA-203ENST00000396603 ZNF257Q9Y2Q1 563 aa12.34□□□□□ -0.43
CLTA-203ENST00000396603 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
CLTA-203ENST00000396603 LGALS9O00182 355 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
CLTA-203ENST00000396603 LPAR6P43657 344 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 SSX9Q7RTT3 188 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 PUSL1Q8N0Z8 303 aaKnown RBP12.33□□□□□ -0.44
CLTA-203ENST00000396603 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 NEURL2Q9BR09 285 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 ZNF430Q9H8G1 570 aaPredicted RBP12.33□□□□□ -0.44
CLTA-203ENST00000396603 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 KCNIP3Q9Y2W7 256 aa12.33□□□□□ -0.44
CLTA-203ENST00000396603 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 MARCH11A6NNE9 402 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 SNAPC5O75971 98 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 PI3P19957 117 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 CD81P60033 236 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 RPL8P62917 257 aaKnown RBP12.32□□□□□ -0.44
CLTA-203ENST00000396603 KLK9Q2XQG4 91 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 CD300EQ496F6 205 aaPredicted RBP12.32□□□□□ -0.44
CLTA-203ENST00000396603 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 KLK9Q9UKQ9 250 aa12.32□□□□□ -0.44
CLTA-203ENST00000396603 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
CLTA-203ENST00000396603 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
CLTA-203ENST00000396603 GGCTO75223 188 aaKnown RBP12.31□□□□□ -0.44
CLTA-203ENST00000396603 IL7P13232 177 aa12.31□□□□□ -0.44
CLTA-203ENST00000396603 DEFA5Q01523 94 aa12.31□□□□□ -0.44
CLTA-203ENST00000396603 ZNF846Q147U1 533 aa12.31□□□□□ -0.44
CLTA-203ENST00000396603 RBMS2Q15434 407 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms