RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.799e-7■■■■■ 39.9
TRIM39-204ENST00000396548 NBR2O15453 112 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 STX12Q86Y82 276 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 ATP5SQ99766 215 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 PARD6GQ9BYG4 376 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 METTL1Q9UBP6 276 aaKnown RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 FCN1O00602 326 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 OR10W1Q8NGF6 305 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 OR1L8Q8NGR8 309 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 SOX21Q9Y651 276 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 TNCP24821 2201 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 C10orf55Q5SWW7 151 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 MMD2Q8IY49 270 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 FBXL15Q9H469 300 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 ANK3Q12955 4377 aaKnown RBP10.13□□□□□ -0.79
TRIM39-204ENST00000396548 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 A0A0U1RQK1 487 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 OPN1MWP04001 364 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 FAM157CP0CG43 387 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 OPN1MW2P0DN77 364 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 OPN1MW3P0DN78 364 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 HOXA1P49639 335 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-204ENST00000396548 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 CIARTQ8N365 385 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-204ENST00000396548 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
TRIM39-204ENST00000396548 SPP1P10451 314 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 CLINT1Q14677 625 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 CLLU1Q5K131 121 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 COMMD5Q9GZQ3 224 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 IGLC7A0M8Q6 106 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 PLEKHA3Q9HB20 300 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 HEYLQ9NQ87 328 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-204ENST00000396548 FGF16O43320 207 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 CA2P00918 260 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 TGFAP01135 160 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 RNASE2P10153 161 aaKnown RBP10.12□□□□□ -0.79
TRIM39-204ENST00000396548 HTR2BP41595 481 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 C2orf83Q53S99 150 aa10.12□□□□□ -0.79
TRIM39-204ENST00000396548 RPP30P78346 268 aaKnown RBP10.11□□□□□ -0.79
TRIM39-204ENST00000396548 SLC38A11Q08AI6 406 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 HNF4GQ14541 408 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 ZNF266Q14584 549 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 MMDQ15546 238 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 Q8N9W7 124 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 BORCS7-ASMTA0A0B4J1R7 106 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 NMBP08949 121 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 FAM106CPP0CH98 169 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 ATP5IP56385 69 aaPredicted RBP10.11□□□□□ -0.79
TRIM39-204ENST00000396548 HBG1P69891 147 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 HBG2P69892 147 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 LRRC75BQ2VPJ9 315 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 FAM74A1Q5RGS3 127 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 ZNF114Q8NC26 417 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
TRIM39-204ENST00000396548 A0A1W2PN81 502 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 DFFBO76075 338 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 SCAF4O95104 1147 aaKnown RBP10.1□□□□□ -0.79
TRIM39-204ENST00000396548 CHRNA7P36544 502 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
TRIM39-204ENST00000396548 ATP6V1FQ16864 119 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 OR8G2PQ6IF36 304 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 TMED6Q8WW62 240 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 SLC25A32Q9H2D1 315 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 FBXO24O75426 580 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 OR8U8P0C7N1 319 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 SEC11BP0C7V7 166 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 TMEM11P17152 192 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 BRS3P32247 399 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 BPIFB3P59826 476 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 CYB5R2Q6BCY4 276 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 TEX15Q9BXT5 2789 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 ANKRD34BA5PLL1 514 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 IFNA10P01566 189 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 NPY1RP25929 384 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 KRTAP1-1Q07627 177 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 OR10P1Q8NGE3 313 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
TRIM39-204ENST00000396548 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 HES1Q14469 280 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 TNXAQ16473 311 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 PINX1Q96BK5 328 aaKnown RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 WDR61Q9GZS3 305 aaKnown RBP10.09□□□□□ -0.79
TRIM39-204ENST00000396548 ENY2Q9NPA8 101 aa10.09□□□□□ -0.79
TRIM39-204ENST00000396548 LINC00862A6NCI5 91 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms