RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TMEM213A2RRL7 107 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 GPR31O00270 319 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 OR13C7P0DN81 318 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 GPR183P32249 361 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 MFAP2P55001 183 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 TM4SF20Q53R12 229 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 CXorf58Q96LI9 332 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 HINT2Q9BX68 163 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 EDA2RQ9HAV5 297 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 RETNQ9HD89 108 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 MLXQ9UH92 298 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 TENM2Q9NT68 2774 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 IGHV3-21A0A0B4J1V1 117 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 DBX1A6NMT0 343 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 SERPINE2P07093 398 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 ERVK-16P61578 105 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 TSPAN5P62079 268 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 FAM106AQ4KMX7 169 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.21
FXN-203ENST00000396366 LINC00322Q6ZN03 302 aaPredicted RBP13.77□□□□□ -0.21
FXN-203ENST00000396366 CMTM1Q8IZ96 169 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 UXS1Q8NBZ7 420 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 CMTM3Q96MX0 182 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 SPATA25Q9BR10 227 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 SRSF8Q9BRL6 282 aaKnown RBP13.77□□□□□ -0.21
FXN-203ENST00000396366 NDUFA4L2Q9NRX3 87 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
FXN-203ENST00000396366 TECRQ9NZ01 308 aaKnown RBP13.77□□□□□ -0.21
FXN-203ENST00000396366 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 RYR2Q92736 4967 aa13.77□□□□□ -0.21
FXN-203ENST00000396366 RBMY1BA6NDE4 496 aaKnown RBP13.76□□□□□ -0.21
FXN-203ENST00000396366 RBMY1EA6NEQ0 496 aaKnown RBP13.76□□□□□ -0.21
FXN-203ENST00000396366 TPPPO94811 219 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 RBMY1DP0C7P1 496 aaKnown RBP13.76□□□□□ -0.21
FXN-203ENST00000396366 SMIM18P0DKX4 95 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 LYL1P12980 280 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 PTBP1P26599 531 aaKnown RBP eCLIP13.76□□□□□ -0.21
FXN-203ENST00000396366 RORCP51449 518 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 ZFAND6Q6FIF0 208 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 SLC25A24Q6NUK1 477 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 TMEM61Q8N0U2 210 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 GDPD1Q8N9F7 314 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 SCPEP1Q9HB40 452 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 SLC2A8Q9NY64 477 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 OR51B2Q9Y5P1 312 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 SACSQ9NZJ4 4579 aa13.76□□□□□ -0.21
FXN-203ENST00000396366 A8MWP6 167 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 M0QYG6 137 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 FGF2P09038 288 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 CTF1Q16619 201 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 TBC1D26Q86UD7 250 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 LAX1Q8IWV1 398 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 CEPT1Q9Y6K0 416 aa13.75□□□□□ -0.21
FXN-203ENST00000396366 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 OR11H12B2RN74 326 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 SNAPC5O75971 98 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 SCAF4O95104 1147 aaKnown RBP13.74□□□□□ -0.21
FXN-203ENST00000396366 IGKV1-39P01597 117 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 IGKV1D-39P04432 117 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 RCVRNP35243 200 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 ZNF57Q68EA5 555 aaPredicted RBP13.74□□□□□ -0.21
FXN-203ENST00000396366 PLET1Q6UQ28 207 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 BTNL8Q6UX41 500 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 FAM110AQ9BQ89 295 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 SRD5A3Q9H8P0 318 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 THYN1Q9P016 225 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 KLK11Q9UBX7 282 aa13.74□□□□□ -0.21
FXN-203ENST00000396366 FAM25AB3EWG3 89 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 FAM25CB3EWG5 89 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 FAM25GB3EWG6 89 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 VN1R17PQ8TDU5 208 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 LSM10Q969L4 123 aaKnown RBP13.73□□□□□ -0.21
FXN-203ENST00000396366 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 PALMDQ9NP74 551 aa13.73□□□□□ -0.21
FXN-203ENST00000396366 F11RQ9Y624 299 aaKnown RBP13.73□□□□□ -0.21
FXN-203ENST00000396366 F8W735 103 aaPredicted RBP13.72□□□□□ -0.21
FXN-203ENST00000396366 TGOLN2O43493 480 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 GABARAPO95166 117 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 C8orf88P0DMB2 117 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 GPR107Q5VW38 600 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 THOC7Q6I9Y2 204 aaKnown RBP13.72□□□□□ -0.21
FXN-203ENST00000396366 LPCAT3Q6P1A2 487 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 HSD17B13Q7Z5P4 300 aaPredicted RBP13.72□□□□□ -0.21
FXN-203ENST00000396366 CADM3Q8N126 398 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 ISOC1Q96CN7 298 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 SEC22AQ96IW7 307 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 CHRDL1Q9BU40 450 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 ZNF436Q9C0F3 470 aaPredicted RBP13.72□□□□□ -0.21
FXN-203ENST00000396366 TMEM14BQ9NUH8 114 aa13.72□□□□□ -0.21
FXN-203ENST00000396366 LYSTQ99698 3801 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 PI3P19957 117 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 UCP3P55916 312 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 MZT2AQ6P582 158 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 SLC38A6Q8IZM9 456 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 OR52I2Q8NH67 350 aa13.71□□□□□ -0.21
FXN-203ENST00000396366 ABHD1Q96SE0 405 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms