RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 LY96Q9Y6Y9 160 aa12.89□□□□□ -0.35
HOXA3-202ENST00000396352 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 AREGP15514 252 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 LGALS4P56470 323 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 DUX4L9Q6RFH8 374 aaPredicted RBP12.88□□□□□ -0.35
HOXA3-202ENST00000396352 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
HOXA3-202ENST00000396352 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 ERVFC1-1P60608 527 aa12.88□□□□□ -0.35
HOXA3-202ENST00000396352 MRPL18Q9H0U6 180 aaKnown RBP12.88□□□□□ -0.35
HOXA3-202ENST00000396352 KBTBD11-OT1A0A1B0GTJ5 212 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 MT-CO2P00403 227 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 FRMD6-AS1P0C7T7 363 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 SEM1Q6ZVN7 128 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 ZCCHC14Q8WYQ9 949 aaKnown RBP12.87□□□□□ -0.35
HOXA3-202ENST00000396352 SNHG12Q9BXW3 62 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 ESDP10768 282 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 OR10J1P30954 320 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF83P51522 516 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 V9GYV3 84 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 FNDC10F2Z333 226 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
HOXA3-202ENST00000396352 RAB31Q13636 194 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 Q6ZWC4 215 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 CBLN4Q9NTU7 201 aa12.87□□□□□ -0.35
HOXA3-202ENST00000396352 CD33P20138 364 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 ITLN1Q8WWA0 313 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 ENY2Q9NPA8 101 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 SLC25A10Q9UBX3 287 aaPredicted RBP12.86□□□□□ -0.35
HOXA3-202ENST00000396352 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 OR51B2Q9Y5P1 312 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 BDP1A6H8Y1 2624 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 ACTL6BO94805 426 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
HOXA3-202ENST00000396352 OR5I1Q13606 314 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 TMEM106BQ9NUM4 274 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 ARL2-SNX15V9GYD0 113 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 SPRY3O43610 288 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 SERF1AO75920 110 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 MRPS11P82912 194 aaKnown RBP12.86□□□□□ -0.35
HOXA3-202ENST00000396352 LYG1Q8N1E2 194 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF503Q96F45 646 aa12.86□□□□□ -0.35
HOXA3-202ENST00000396352 M0R296 226 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 NEU1Q99519 415 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 CADP27708 2225 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 CRISP2P16562 243 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 KLF3P57682 345 aaPredicted RBP12.85□□□□□ -0.35
HOXA3-202ENST00000396352 PSG5Q15238 335 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 TBX15Q96SF7 602 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 HINT2Q9BX68 163 aa12.85□□□□□ -0.35
HOXA3-202ENST00000396352 F2Z2F3 143 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 M0R1B8 84 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 NABP2Q9BQ15 211 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 A8MXE2 369 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 IER3P46695 156 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 TPPP2P59282 170 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 TPTE2P1Q5T6R2 138 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 CORO2AQ92828 525 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 ZNF257Q9Y2Q1 563 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 J3QR06 171 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 FCN1O00602 326 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 GNG10P50151 68 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 STUMQ69YW2 141 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 PRNDQ9UKY0 176 aa12.84□□□□□ -0.35
HOXA3-202ENST00000396352 IGLV3-9A0A075B6K5 115 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 MMP23AO75900 390 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 OR10J4P0C629 311 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 CRYBB3P26998 211 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 GATA4P43694 442 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 VHLLQ6RSH7 139 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
HOXA3-202ENST00000396352 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.36
HOXA3-202ENST00000396352 RAB9BQ9NP90 201 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms