RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 IGHV1-3A0A0C4DH29 117 aa16.42■□□□□ 0.22
PRKCD-202ENST00000394729 RPP25LQ8N5L8 163 aaKnown RBP16.42■□□□□ 0.22
PRKCD-202ENST00000394729 ZNF709Q8N972 641 aa16.42■□□□□ 0.22
PRKCD-202ENST00000394729 OR10A7Q8NGE5 316 aa16.42■□□□□ 0.22
PRKCD-202ENST00000394729 FBXL15Q9H469 300 aa16.42■□□□□ 0.22
PRKCD-202ENST00000394729 GAB2Q9UQC2 676 aa16.42■□□□□ 0.22
PRKCD-202ENST00000394729 TIMM23O14925 209 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 IGLV1-47P01700 117 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 NPBWR1P48145 328 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 TNXAQ16473 311 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 MIC13Q5XKP0 118 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 CBLN2Q8IUK8 224 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 EFNA4P52798 201 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 GATAD1Q8WUU5 269 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 CCL19Q99731 98 aa16.41■□□□□ 0.22
PRKCD-202ENST00000394729 SNRPCP09234 159 aaKnown RBP16.41■□□□□ 0.22
PRKCD-202ENST00000394729 FAM103A1Q9BTL3 118 aaKnown RBP16.41■□□□□ 0.22
PRKCD-202ENST00000394729 FOXA2Q9Y261 457 aaPredicted RBP16.41■□□□□ 0.22
PRKCD-202ENST00000394729 ACTL6BO94805 426 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 ARSJQ5FYB0 599 aaPredicted RBP16.4■□□□□ 0.22
PRKCD-202ENST00000394729 VMO1Q7Z5L0 202 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 ZNF429Q86V71 674 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 PRNDQ9UKY0 176 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 SONP18583 2426 aaKnown RBP16.4■□□□□ 0.22
PRKCD-202ENST00000394729 UMAD1C9J7I0 102 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 FCN1O00602 326 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 DVL1P1P54792 670 aaPredicted RBP16.4■□□□□ 0.22
PRKCD-202ENST00000394729 ZNF787Q6DD87 383 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 OSR1Q8TAX0 266 aaPredicted RBP16.4■□□□□ 0.22
PRKCD-202ENST00000394729 ACY3Q96HD9 319 aa16.4■□□□□ 0.22
PRKCD-202ENST00000394729 NOTCH2Q04721 2471 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1W2PPH5 198 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 IGFBP2P18065 325 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 RAB5CP51148 216 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 KIAA0141Q14154 515 aaPredicted RBP16.39■□□□□ 0.21
PRKCD-202ENST00000394729 TREML4Q6UXN2 200 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 hCG_1809904A0A1W2PP81 198 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1W2PPE2 198 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1W2PR64 198 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1W2PRV1 198 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 TLE4Q04727 773 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 OR10G4Q8NGN3 311 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 OR10G9Q8NGN4 311 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 OR10G7Q8NGN6 311 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 CLDND2Q8NHS1 167 aa16.39■□□□□ 0.21
PRKCD-202ENST00000394729 PUS1Q9Y606 427 aaKnown RBP eCLIP16.39■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1B0GW64 132 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 TRIM77I1YAP6 450 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 IL3RAP26951 378 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 WT1-ASQ06250 92 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 MAPK1IP1LQ8NDC0 245 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 SUN5Q8TC36 379 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 SLC39A9Q9NUM3 307 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 IGLV2-23P01705 113 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 RAB11AP62491 216 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 DYNAPQ8N1N2 210 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 OR2T6Q8NHC8 308 aa16.38■□□□□ 0.21
PRKCD-202ENST00000394729 NKX6-2Q9C056 277 aaPredicted RBP16.38■□□□□ 0.21
PRKCD-202ENST00000394729 METTL1Q9UBP6 276 aaKnown RBP16.38■□□□□ 0.21
PRKCD-202ENST00000394729 MAP1LC3B2A6NCE7 125 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 M0R036 132 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 ATP5J2P56134 94 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 MMDQ15546 238 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 PDLIM3Q53GG5 364 aaPredicted RBP16.37■□□□□ 0.21
PRKCD-202ENST00000394729 UQCC3Q6UW78 93 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 MAP1LC3BQ9GZQ8 125 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 CREBBPQ92793 2442 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 RBFOX3A6NFN3 312 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 CD5P06127 495 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 AREGP15514 252 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 HTR1DP28221 377 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 PRCDQ00LT1 54 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 TMEM30BQ3MIR4 351 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 DHRS7BQ6IAN0 325 aaPredicted RBP16.37■□□□□ 0.21
PRKCD-202ENST00000394729 PDPNQ86YL7 162 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 UBE2G2P60604 165 aa16.37■□□□□ 0.21
PRKCD-202ENST00000394729 A0A087X0M5 115 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 A0A1B0GX30 115 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 TMEM177Q53S58 311 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 LYPD6BQ8NI32 183 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 MGST2Q99735 147 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 CGB1A6NKQ9 187 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 LINC00311Q8N616 119 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 BET1LQ9NYM9 111 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 S4R3C0 116 aa16.36■□□□□ 0.21
PRKCD-202ENST00000394729 ZNF469Q96JG9 3925 aaPredicted RBP16.35■□□□□ 0.21
PRKCD-202ENST00000394729 SNRNP70P08621 437 aaKnown RBP16.35■□□□□ 0.21
PRKCD-202ENST00000394729 RPP30P78346 268 aaKnown RBP16.35■□□□□ 0.21
PRKCD-202ENST00000394729 SSBP2P81877 361 aaPredicted RBP16.35■□□□□ 0.21
PRKCD-202ENST00000394729 VMA21Q3ZAQ7 101 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 TMEM41BQ5BJD5 291 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 RUSC1-AS1Q66K80 236 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 CYB561D1Q8N8Q1 229 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 OR52E5Q8NH55 327 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 ZNF596Q8TC21 504 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 MARVELD3Q96A59 401 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 SCRT1Q9BWW7 348 aa16.35■□□□□ 0.21
PRKCD-202ENST00000394729 SRSF1Q07955 248 aaKnown RBP eCLIP16.35■□□□□ 0.21
PRKCD-202ENST00000394729 NCBP2LA6PVI3 153 aaKnown RBP16.34■□□□□ 0.21
PRKCD-202ENST00000394729 IGHV2-5P01817 119 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms