RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TPSG1Q9NRR2 321 aa12.04□□□□□ -0.48
CCT4-201ENST00000394440 DPM3Q9P2X0 92 aa12.04□□□□□ -0.48
CCT4-201ENST00000394440 FAM96BQ9Y3D0 163 aa12.04□□□□□ -0.48
CCT4-201ENST00000394440 FAM157AC9JC47 383 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 E7EUB6 86 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 CD1BP29016 333 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
CCT4-201ENST00000394440 VMO1Q7Z5L0 202 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 TEX45Q8NA69 505 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 HINT2Q9BX68 163 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 COMMD5Q9GZQ3 224 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 TMEM231Q9H6L2 316 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 LRRK2Q5S007 2527 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 LCN2P80188 198 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 NAV3Q8IVL0 2385 aa12.03□□□□□ -0.48
CCT4-201ENST00000394440 A0A1B0GW64 132 aa12.02□□□□□ -0.48
CCT4-201ENST00000394440 RNASEK-C17orf49H0YIS7 233 aa12.02□□□□□ -0.48
CCT4-201ENST00000394440 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.48
CCT4-201ENST00000394440 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.48
CCT4-201ENST00000394440 ATP5IP56385 69 aaPredicted RBP12.02□□□□□ -0.48
CCT4-201ENST00000394440 TREML4Q6UXN2 200 aa12.02□□□□□ -0.48
CCT4-201ENST00000394440 CFHR4Q92496 578 aa12.02□□□□□ -0.48
CCT4-201ENST00000394440 NARS2Q96I59 477 aaKnown RBP12.02□□□□□ -0.48
CCT4-201ENST00000394440 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.48
CCT4-201ENST00000394440 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 BTBD17A6NE02 478 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 IFNA4P05014 189 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 CNTFRP26992 372 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 ZNF726P1Q15940 193 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 C10orf91Q5T1B1 145 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 ACSM6Q6P461 480 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 LHFPL4Q7Z7J7 247 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 OR10W1Q8NGF6 305 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 RNF5Q99942 180 aa12.02□□□□□ -0.49
CCT4-201ENST00000394440 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 IGKV1D-33P01593 117 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 IGKV1-33P01594 117 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 RNASE2P10153 161 aaKnown RBP12.01□□□□□ -0.49
CCT4-201ENST00000394440 CEACAM3P40198 252 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 PSG5Q15238 335 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 C10orf105Q8TEF2 133 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 TREM1Q9NP99 234 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 C9JQL5 133 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 TIMM23O14925 209 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 CCL20P78556 96 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 GUK1Q16774 197 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
CCT4-201ENST00000394440 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 C1orf159Q96HA4 380 aa12.01□□□□□ -0.49
CCT4-201ENST00000394440 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
CCT4-201ENST00000394440 A0A1W2PN81 502 aa12□□□□□ -0.49
CCT4-201ENST00000394440 FNDC10F2Z333 226 aa12□□□□□ -0.49
CCT4-201ENST00000394440 NDUFS8O00217 210 aa12□□□□□ -0.49
CCT4-201ENST00000394440 MPDU1O75352 247 aa12□□□□□ -0.49
CCT4-201ENST00000394440 VENTXO95231 258 aa12□□□□□ -0.49
CCT4-201ENST00000394440 CHRNA7P36544 502 aa12□□□□□ -0.49
CCT4-201ENST00000394440 SSX7Q7RTT5 188 aa12□□□□□ -0.49
CCT4-201ENST00000394440 FAM168AQ92567 244 aa12□□□□□ -0.49
CCT4-201ENST00000394440 RCC1LQ96I51 464 aaKnown RBP12□□□□□ -0.49
CCT4-201ENST00000394440 PIMREGQ9BSJ6 248 aa12□□□□□ -0.49
CCT4-201ENST00000394440 KIAA1456Q9P272 454 aa12□□□□□ -0.49
CCT4-201ENST00000394440 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
CCT4-201ENST00000394440 FOXH1O75593 365 aa12□□□□□ -0.49
CCT4-201ENST00000394440 ELLP55199 621 aaPredicted RBP12□□□□□ -0.49
CCT4-201ENST00000394440 WT1-ASQ06250 92 aa12□□□□□ -0.49
CCT4-201ENST00000394440 HNF4GQ14541 408 aa12□□□□□ -0.49
CCT4-201ENST00000394440 PRSS8Q16651 343 aa12□□□□□ -0.49
CCT4-201ENST00000394440 MMD2Q8IY49 270 aa12□□□□□ -0.49
CCT4-201ENST00000394440 PSMG3-AS1Q96PY0 264 aa12□□□□□ -0.49
CCT4-201ENST00000394440 TBX15Q96SF7 602 aa12□□□□□ -0.49
CCT4-201ENST00000394440 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
CCT4-201ENST00000394440 A0A1B0GV50 99 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 SCO1O75880 301 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 HBE1P02100 147 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 APOC3P02656 99 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 RAB2AP61019 212 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 RPP25LQ8N5L8 163 aaKnown RBP11.99□□□□□ -0.49
CCT4-201ENST00000394440 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 SPG11Q96JI7 2443 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 MAST4O15021 2626 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 ATP5J2P56134 94 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 MINOS1Q5TGZ0 78 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 HILPDAQ9Y5L2 63 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 MINOS1-NBL1R4GNA1 71 aa11.99□□□□□ -0.49
CCT4-201ENST00000394440 UTP20O75691 2785 aaKnown RBP11.98□□□□□ -0.49
CCT4-201ENST00000394440 OOSP1A8MZH6 123 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 PAX1P15863 534 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 MGST2Q99735 147 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 IGHV4-61A0A0C4DH41 118 aa11.98□□□□□ -0.49
CCT4-201ENST00000394440 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms