RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 HIST1H2BAQ96A08 127 aa12.2□□□□□ -0.46
GPC3-202ENST00000394299 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
GPC3-202ENST00000394299 A0A087X0M5 115 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 IGHV2-26A0A0B4J1V2 119 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 A0A1B0GX30 115 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 CNTFRP26992 372 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 TAGLN2P37802 199 aaKnown RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 SAV1Q9H4B6 383 aaPredicted RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 CACNA1AO00555 2505 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 SLC25A17O43808 307 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 SOX15O60248 233 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 MBP02144 154 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 IGFBP2P18065 325 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 PPOXP50336 477 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 ACOT6Q3I5F7 207 aaPredicted RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 WDR25Q64LD2 544 aaPredicted RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 OR4C13Q8NGP0 309 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 C2CD4CQ8TF44 421 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 CBLN4Q9NTU7 201 aa12.19□□□□□ -0.46
GPC3-202ENST00000394299 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 KLF2Q9Y5W3 355 aaPredicted RBP12.19□□□□□ -0.46
GPC3-202ENST00000394299 ZNF98A6NK75 572 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 C22orf46C9J442 243 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 CYB5BO43169 146 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 PAGE4O60829 102 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
GPC3-202ENST00000394299 CDKN1AP38936 164 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
GPC3-202ENST00000394299 RAB1BQ9H0U4 201 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 MLXQ9UH92 298 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 CFAP46Q8IYW2 2715 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 hCG_1809904A0A1W2PP81 198 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 A0A1W2PR64 198 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 A0A1W2PRV1 198 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 C19orf84I3L1E1 186 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 LY86O95711 162 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 IGHV3-48P01763 117 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 COMMD5Q9GZQ3 224 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
GPC3-202ENST00000394299 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
GPC3-202ENST00000394299 NAV3Q8IVL0 2385 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 IGKV1OR2-108A0A075B7D4 117 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 APELAP0DMC3 54 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 UBE2G2P60604 165 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 RHEBQ15382 184 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 LDLRAD2Q5SZI1 272 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 UNKLQ9H9P5 680 aaKnown RBP12.17□□□□□ -0.46
GPC3-202ENST00000394299 NDUFA4L2Q9NRX3 87 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 ONECUT1Q9UBC0 465 aa12.17□□□□□ -0.46
GPC3-202ENST00000394299 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 OPRK1P41145 380 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 ZNF137PP52743 207 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 ARF6P62330 175 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 MEF2BQ02080 365 aaPredicted RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 MRGPRG-AS1Q2M3A8 158 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 PDPNQ86YL7 162 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 C8orf31Q8N9H6 132 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 ABHD5Q8WTS1 349 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 SIRT7Q9NRC8 400 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 REG1AP05451 166 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 TEPPQ6URK8 271 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 RBMS3Q6XE24 437 aaKnown RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 PNKDQ8N490 385 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR4F5Q8NH21 305 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR5B3Q8NH48 314 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 RPUSD4Q96CM3 377 aaKnown RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
GPC3-202ENST00000394299 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
GPC3-202ENST00000394299 OR2C1O95371 312 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 C19orf35Q6ZS72 473 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 STPG3Q8N7X2 389 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 TMEM167AQ8TBQ9 72 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 ITLN2Q8WWU7 325 aaPredicted RBP12.15□□□□□ -0.46
GPC3-202ENST00000394299 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms