RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 VPREB3Q9UKI3 123 aa19.26■□□□□ 0.67
LRFN4-202ENST00000393952 L7N2F9 121 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 CNIH1O95406 144 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 HLA-DRB1P01911 266 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 HOXA1P49639 335 aaPredicted RBP19.25■□□□□ 0.67
LRFN4-202ENST00000393952 PAX9P55771 341 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 VAMP2P63027 116 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 CX3CL1P78423 397 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 C16orf82Q7Z2V1 217 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 OR10W1Q8NGF6 305 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 PPP1R14BQ96C90 147 aa19.25■□□□□ 0.67
LRFN4-202ENST00000393952 E5RGE8 158 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 PVALBP20472 110 aaPredicted RBP19.24■□□□□ 0.67
LRFN4-202ENST00000393952 VDAC2P45880 294 aaPredicted RBP19.24■□□□□ 0.67
LRFN4-202ENST00000393952 SCGB2A2Q13296 93 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 FXYD3Q14802 87 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 ZNF562Q6V9R5 426 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 RBMS3Q6XE24 437 aaKnown RBP19.24■□□□□ 0.67
LRFN4-202ENST00000393952 SRSF12Q8WXF0 261 aaKnown RBP19.24■□□□□ 0.67
LRFN4-202ENST00000393952 HYLS1Q96M11 299 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 DUX5Q96PT3 197 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 HSPB9Q9BQS6 159 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 PLEKHA3Q9HB20 300 aa19.24■□□□□ 0.67
LRFN4-202ENST00000393952 NSD1Q96L73 2696 aaPredicted RBP19.24■□□□□ 0.67
LRFN4-202ENST00000393952 IGHV7-81A0A0B4J1V7 117 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 NDPQ00604 133 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 ZNF546Q86UE3 836 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 SMIM8Q96KF7 97 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 ENY2Q9NPA8 101 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 H3BP45 60 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 TMEM65Q6PI78 240 aa19.23■□□□□ 0.67
LRFN4-202ENST00000393952 HEYLQ9NQ87 328 aaPredicted RBP19.23■□□□□ 0.67
LRFN4-202ENST00000393952 M0QZK8 103 aa19.22■□□□□ 0.67
LRFN4-202ENST00000393952 ARPC5O15511 151 aa19.22■□□□□ 0.67
LRFN4-202ENST00000393952 ARPC1AQ92747 370 aa19.22■□□□□ 0.67
LRFN4-202ENST00000393952 CIB3Q96Q77 187 aaPredicted RBP19.22■□□□□ 0.67
LRFN4-202ENST00000393952 FAM103A1Q9BTL3 118 aaKnown RBP19.22■□□□□ 0.67
LRFN4-202ENST00000393952 PSENENQ9NZ42 101 aa19.22■□□□□ 0.67
LRFN4-202ENST00000393952 TNFSF18Q9UNG2 199 aa19.22■□□□□ 0.67
LRFN4-202ENST00000393952 MSGN1A6NI15 193 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 HMSDA8MTL9 139 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 TEX22C9J3V5 150 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 APELAP0DMC3 54 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 P2RY1P47900 373 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 EIF2B2P49770 351 aaKnown RBP19.21■□□□□ 0.67
LRFN4-202ENST00000393952 RPL23AP62750 156 aaKnown RBP19.21■□□□□ 0.67
LRFN4-202ENST00000393952 TMEM86BQ8N661 226 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 WSB1Q9Y6I7 421 aa19.21■□□□□ 0.67
LRFN4-202ENST00000393952 A0A1W2PN81 502 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 IGLC7A0M8Q6 106 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 FAM24AA6NFZ4 105 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 GPR137BO60478 399 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 CHRNA7P36544 502 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 CAV2P51636 162 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 TAS2R30P59541 319 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 WT1-ASQ06250 92 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 ABHD5Q8WTS1 349 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 HIPK2Q9H2X6 1198 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 LYRM2Q9NU23 88 aaPredicted RBP19.2■□□□□ 0.66
LRFN4-202ENST00000393952 FBXO7Q9Y3I1 522 aa19.2■□□□□ 0.66
LRFN4-202ENST00000393952 DNAJC9-AS1A6NH13 148 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 BLCAPP62952 87 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 C9orf152Q5JTZ5 239 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 SPANXN5Q5MJ07 72 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 OR2C3Q8N628 320 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 OR4C12Q96R67 309 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 FN1P02751 2386 aaKnown RBP19.19■□□□□ 0.66
LRFN4-202ENST00000393952 IGSF23A1L1A6 192 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 RNF222A6NCQ9 220 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 LINC01548A6NM66 108 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 TSC22D2O75157 780 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 AREGP15514 252 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 MFFQ9GZY8 342 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 ESM1Q9NQ30 184 aa19.19■□□□□ 0.66
LRFN4-202ENST00000393952 REG1AP05451 166 aa19.18■□□□□ 0.66
LRFN4-202ENST00000393952 OR13C7P0DN81 318 aa19.18■□□□□ 0.66
LRFN4-202ENST00000393952 HKR1P10072 659 aa19.18■□□□□ 0.66
LRFN4-202ENST00000393952 EGR2P11161 476 aaPredicted RBP19.18■□□□□ 0.66
LRFN4-202ENST00000393952 CXCL2P19875 107 aa19.18■□□□□ 0.66
LRFN4-202ENST00000393952 RPL12P30050 165 aaKnown RBP19.18■□□□□ 0.66
LRFN4-202ENST00000393952 INO80EQ8NBZ0 244 aaPredicted RBP19.18■□□□□ 0.66
LRFN4-202ENST00000393952 PARP11Q9NR21 331 aa19.18■□□□□ 0.66
LRFN4-202ENST00000393952 INS-IGF2F8WCM5 200 aa19.17■□□□□ 0.66
LRFN4-202ENST00000393952 LY86O95711 162 aa19.17■□□□□ 0.66
LRFN4-202ENST00000393952 IFNA10P01566 189 aa19.17■□□□□ 0.66
LRFN4-202ENST00000393952 NUP62P37198 522 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-202ENST00000393952 AP2S1P53680 142 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-202ENST00000393952 TMEM267Q0VDI3 215 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-202ENST00000393952 Q6ZS46 218 aa19.17■□□□□ 0.66
LRFN4-202ENST00000393952 TMEM252Q8N6L7 170 aa19.17■□□□□ 0.66
LRFN4-202ENST00000393952 PAIP2BQ9ULR5 123 aaKnown RBP19.17■□□□□ 0.66
LRFN4-202ENST00000393952 STRAPQ9Y3F4 350 aaKnown RBP19.17■□□□□ 0.66
LRFN4-202ENST00000393952 ATP6V0E1O15342 81 aa19.16■□□□□ 0.66
LRFN4-202ENST00000393952 ERHP84090 104 aaKnown RBP19.16■□□□□ 0.66
LRFN4-202ENST00000393952 ACOT7LQ6ZUV0 252 aa19.16■□□□□ 0.66
LRFN4-202ENST00000393952 C9orf62Q8N4C0 152 aa19.16■□□□□ 0.66
LRFN4-202ENST00000393952 ZNF418Q8TF45 676 aaPredicted RBP19.16■□□□□ 0.66
LRFN4-202ENST00000393952 TMEM170AQ8WVE7 144 aa19.16■□□□□ 0.66
LRFN4-202ENST00000393952 AQP10Q96PS8 301 aa19.16■□□□□ 0.66
LRFN4-202ENST00000393952 MAST4O15021 2626 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms