RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CA2P00918 260 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 MSMBP08118 114 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 BLOC1S1P78537 153 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 ERHP84090 104 aaKnown RBP6.94□□□□□ -1.3
TDP1-203ENST00000393454 MMDQ15546 238 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 TNXAQ16473 311 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 LRRC75BQ2VPJ9 315 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 DEFB113Q30KQ7 82 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 CFHR4Q92496 578 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 SAT2Q96F10 170 aaPredicted RBP6.94□□□□□ -1.3
TDP1-203ENST00000393454 RNF5Q99942 180 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 RSG1Q9BU20 258 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 HRH4Q9H3N8 390 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 FBXL15Q9H469 300 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 SIGLEC9Q9Y336 463 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 FBXO7Q9Y3I1 522 aa6.94□□□□□ -1.3
TDP1-203ENST00000393454 FBN2P35556 2912 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 CENPVL3A0A0U1RRI6 287 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 A0A1W2PN81 502 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 B4DSR2 109 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 E7EUB6 86 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 NPFFO15130 113 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 SNRNP70P08621 437 aaKnown RBP6.93□□□□□ -1.3
TDP1-203ENST00000393454 FGF7P21781 194 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 SAA4P35542 130 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 CHRNA7P36544 502 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 ZNF616Q08AN1 781 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 PRSS8Q16651 343 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 PXDC1Q5TGL8 231 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 Q6ZRG5 221 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 FAM213BQ8TBF2 198 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
TDP1-203ENST00000393454 MALSU1Q96EH3 234 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
TDP1-203ENST00000393454 PSMG3-AS1Q96PY0 264 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 WDR61Q9GZS3 305 aaKnown RBP6.93□□□□□ -1.3
TDP1-203ENST00000393454 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 KIAA1456Q9P272 454 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 AUP1Q9Y679 476 aa6.93□□□□□ -1.3
TDP1-203ENST00000393454 HELZ2Q9BYK8 2649 aaKnown RBP6.93□□□□□ -1.3
TDP1-203ENST00000393454 NCBP2LA6PVI3 153 aaKnown RBP6.92□□□□□ -1.3
TDP1-203ENST00000393454 NBR2O15453 112 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 CNIH1O95406 144 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 CRYGBP07316 175 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 RPL27AP46776 148 aaKnown RBP6.92□□□□□ -1.3
TDP1-203ENST00000393454 RAB5CP51148 216 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 AKR1C8PQ5T2L2 129 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 TMEM170AQ8WVE7 144 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 HIF1ANQ9NWT6 349 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 PLXNB1O43157 2135 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 FCN1O00602 326 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 APELAP0DMC3 54 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 MAS1LP35410 378 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 FHITP49789 147 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 HABP2Q14520 560 aaPredicted RBP6.92□□□□□ -1.3
TDP1-203ENST00000393454 AANATQ16613 207 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 TUSC1Q2TAM9 212 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 Q5PR19 223 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 ZNF709Q8N972 641 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 MAPK1IP1LQ8NDC0 245 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 PARP11Q9NR21 331 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 NAV2Q8IVL1 2488 aa6.92□□□□□ -1.3
TDP1-203ENST00000393454 TRAV40A0A0B4J280 105 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 IGHV1-69DA0A0B4J2H0 117 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 A0A1B0GV50 99 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 ANKRD34BA5PLL1 514 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 MFSD2BA6NFX1 497 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 CGB1A6NKQ9 187 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 TRIM77I1YAP6 450 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 I3L521 148 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 IGHV1-69P01742 117 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 REG1AP05451 166 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 FAM106CPP0CH98 169 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 RNASE2P10153 161 aaKnown RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 TMEM11P17152 192 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 BRS3P32247 399 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 SUB1P53999 127 aaKnown RBP eCLIP6.91□□□□□ -1.3
TDP1-203ENST00000393454 FAM120AOSQ5T036 256 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 BTNL8Q6UX41 500 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 LRRC75A-AS1Q8N1F1 130 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 MARC2Q969Z3 335 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 PARD6GQ9BYG4 376 aaPredicted RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 REG4Q9BYZ8 158 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 A0A1B0GW64 132 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 AGPAT2O15120 278 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 TSPAN15O95858 294 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms