RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
SUMO1-203ENST00000392246 TMEM65Q6PI78 240 aa11.67□□□□□ -0.54
SUMO1-203ENST00000392246 Q6ZRM9 215 aa11.67□□□□□ -0.54
SUMO1-203ENST00000392246 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
SUMO1-203ENST00000392246 SRSF8Q9BRL6 282 aaKnown RBP11.67□□□□□ -0.54
SUMO1-203ENST00000392246 NDUFA4L2Q9NRX3 87 aa11.67□□□□□ -0.54
SUMO1-203ENST00000392246 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.67□□□□□ -0.54
SUMO1-203ENST00000392246 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 INMT-MINDY4F8WBC2 141 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 SOX15O60248 233 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 PTTG1O95997 202 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 IL5P05113 134 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
SUMO1-203ENST00000392246 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 RNF152Q8N8N0 203 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 OR52B4Q8NGK2 314 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
SUMO1-203ENST00000392246 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 CITED2Q99967 270 aaPredicted RBP11.66□□□□□ -0.54
SUMO1-203ENST00000392246 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 PDCD10Q9BUL8 212 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 TMED3Q9Y3Q3 217 aa11.66□□□□□ -0.54
SUMO1-203ENST00000392246 H3BUA1 57 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 SULT1A3P0DMM9 295 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 SULT1A4P0DMN0 295 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 PF4V1P10720 104 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 RAB9AP51151 201 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.54
SUMO1-203ENST00000392246 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
SUMO1-203ENST00000392246 SEC22CQ9BRL7 303 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 HINT2Q9BX68 163 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 ZNF355PQ9NSJ1 428 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 ZFP57Q9NU63 452 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
SUMO1-203ENST00000392246 TSSC4Q9Y5U2 329 aaPredicted RBP11.65□□□□□ -0.54
SUMO1-203ENST00000392246 A0A1B0GU03 582 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 NPIPB5A8MRT5 1133 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 BRI3O95415 125 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 IFNA17P01571 189 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.55
SUMO1-203ENST00000392246 HOXB5P09067 269 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 PSMB6P28072 239 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 PRCDQ00LT1 54 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 SMCO1Q147U7 214 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 AARDQ4LEZ3 155 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 MRPL41Q8IXM3 137 aaKnown RBP11.65□□□□□ -0.55
SUMO1-203ENST00000392246 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 OR52E5Q8NH55 327 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 KLK15Q9H2R5 256 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 SLA2Q9H6Q3 261 aa11.65□□□□□ -0.55
SUMO1-203ENST00000392246 PRAF2O60831 178 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 DHFRP00374 187 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 IFNA21P01568 189 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 CRYGCP07315 174 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 SLC25A6P12236 298 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 AREGP15514 252 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 CTRB1P17538 263 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 GGNBP1Q5YKI7 109 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 CTRB2Q6GPI1 263 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 LCNL1Q6ZST4 164 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 MS4A10Q96PG2 267 aa11.64□□□□□ -0.55
SUMO1-203ENST00000392246 GPN1Q9HCN4 374 aaPredicted RBP11.64□□□□□ -0.55
SUMO1-203ENST00000392246 OR13C7P0DN81 318 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 SPNP16150 400 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 SPCS3P61009 180 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 RPL23AP62750 156 aaKnown RBP11.63□□□□□ -0.55
SUMO1-203ENST00000392246 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 MYOZ3Q8TDC0 251 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 PLEKHA3Q9HB20 300 aa11.63□□□□□ -0.55
SUMO1-203ENST00000392246 ADAP1O75689 374 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 TRGV3P03979 118 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 REG1AP05451 166 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 DEFA4P12838 97 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 CDX1P47902 265 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-203ENST00000392246 TPPP2P59282 170 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 ERHP84090 104 aaKnown RBP11.62□□□□□ -0.55
SUMO1-203ENST00000392246 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 NSUN5P1Q3KNT7 163 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 PDLIM3Q53GG5 364 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-203ENST00000392246 C12orf45Q8N5I9 185 aaPredicted RBP11.62□□□□□ -0.55
SUMO1-203ENST00000392246 UXS1Q8NBZ7 420 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 OR1S1Q8NH92 325 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 UBE2E2Q96LR5 201 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 ANK2Q01484 3957 aa11.62□□□□□ -0.55
SUMO1-203ENST00000392246 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 SNRPGP15A8MWD9 76 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 PITX3O75364 302 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 PRH1P02810 166 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 KIAA0141Q14154 515 aaPredicted RBP11.61□□□□□ -0.55
SUMO1-203ENST00000392246 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 ZNF491Q8N8L2 437 aa11.61□□□□□ -0.55
SUMO1-203ENST00000392246 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms