RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 KCNS1Q96KK3 526 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 CCL13Q99616 98 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 TSSK6Q9BXA6 273 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 C16orf95Q9H693 158 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 NPVFQ9HCQ7 196 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 CLCF1Q9UBD9 225 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 MARCOQ9UEW3 520 aaPredicted RBP2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 NOP16Q9Y3C1 178 aaKnown RBP2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 FLVCR1Q9Y5Y0 555 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 MYH1P12882 1939 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 CHD4Q14839 1912 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 KNDC1Q76NI1 1749 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 ARAP2Q8WZ64 1704 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 ARHGAP5Q13017 1502 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 DSPPQ9NZW4 1301 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 LAMB4A4D0S4 1761 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 LTN1O94822 1766 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 LRRK1Q38SD2 2015 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 NUP205Q92621 2012 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 PARP14Q460N5 1801 aa2.61□□□□□ -1.99
TRAJ17-201ENST00000390520 MYH7BA7E2Y1 1941 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 ALPK3Q96L96 1907 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 PXDNLA1KZ92 1463 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SCN5AQ14524 2016 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 A0A087WXM4 84 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 TRGV10A0A0A0MS01 117 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGHV1-69DA0A0B4J2H0 117 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGHV1-58A0A0C4DH39 117 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 A0A0D9SG52 128 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 KRTAP23-1A1A580 65 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 EPOPA6NHQ4 379 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 A8MUN3 132 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 M0R381 172 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LGALS9O00182 355 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LST1O00453 97 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 GEMIN2O14893 280 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 AGPAT2O15120 278 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SOCS1O15524 211 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 DEDDO75618 318 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGLV1-40P01703 118 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGHV4-39P01824 125 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SEC11BP0C7V7 166 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LINC00032P0C843 101 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGHV4-38-2P0DP08 117 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 IGLL1P15814 213 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 CRISP2P16562 243 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SDC2P34741 201 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 ACVRL1P37023 503 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 NCBP2P52298 156 aaKnown RBP eCLIP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LINC00313P59037 77 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 YPEL3P61236 119 aaPredicted RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 ELOCQ15369 112 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 MRPL2Q5T653 305 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 MRPL54Q6P161 138 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 C22orf39Q6P5X5 142 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 UNQ5815/PRO19632Q6UWF5 114 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 Q6ZPA2 131 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SHISA6Q6ZSJ9 500 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 RFLNAQ6ZTI6 216 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 AAED1Q7RTV5 226 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 TRAPPC6BQ86SZ2 158 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LINC00471Q8N535 108 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 DRAM1Q8N682 238 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 LINC00301Q8NCQ3 95 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SMRP1Q8NCR6 262 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 OR2T10Q8NGZ9 312 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 OR4A5Q8NH83 315 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 OR9G1Q8NH87 305 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 OTOSQ8NHW6 89 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 FLVCR1-AS1Q8TAF5 88 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 MRPL30Q8TCC3 161 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 C10orf82Q8WW14 230 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 POP5Q969H6 163 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 ZC2HC1AQ96GY0 325 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 URB1-AS1Q96HZ7 61 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 C2orf50Q96LR7 162 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 PEBP4Q96S96 227 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 SEC11CQ9BY50 192 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 C11orf68Q9H3H3 251 aaKnown RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 ZNF702PQ9H963 129 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 AK3Q9UIJ7 227 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 HES2Q9Y543 173 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 HEBP2Q9Y5Z4 205 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 CHCHD2Q9Y6H1 151 aaPredicted RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 FER1L5A0AVI2 2057 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 TRPM1Q7Z4N2 1603 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 MROH1Q8NDA8 1641 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 GREB1LQ9C091 1923 aaPredicted RBP2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 KIF1AQ12756 1690 aa2.6□□□□□ -1.99
TRAJ17-201ENST00000390520 RGS12O14924 1447 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 ADAMTS13Q76LX8 1427 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 PRXQ9BXM0 1461 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 RBBP6Q7Z6E9 1792 aaKnown RBP2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 UGGT2Q9NYU1 1516 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 SMIM26A0A096LP01 95 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 TEX48A0A1B0GUV7 120 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 IRGMA1A4Y4 181 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 ODAMA1E959 279 aa2.59□□□□□ -1.99
TRAJ17-201ENST00000390520 DPRXA6NFQ7 191 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms