RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 CD24P25063 80 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 RPS20P60866 119 aaKnown RBP8.57□□□□□ -1.04
PKP4-201ENST00000389757 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
PKP4-201ENST00000389757 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 TIMM23O14925 209 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 WNT2P09544 360 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 CYB5R2Q6BCY4 276 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 FAM89BQ8N5H3 189 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 FAM169BQ8N8A8 192 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
PKP4-201ENST00000389757 DPRXA6NFQ7 191 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 UPK2O00526 184 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 HERVK_113P61574 105 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 TMEM97Q5BJF2 176 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 CLDND2Q8NHS1 167 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 SRSF12Q8WXF0 261 aaKnown RBP8.57□□□□□ -1.04
PKP4-201ENST00000389757 ISOC2Q96AB3 205 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 J3QKU1 62 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 SLC25A16P16260 332 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 SGMS2Q8NHU3 365 aa8.57□□□□□ -1.04
PKP4-201ENST00000389757 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 PMS2P11Q13670 270 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 CACNG8Q8WXS5 425 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 SPSB4Q96A44 273 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 MED12Q93074 2177 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 HEATR5BQ9P2D3 2071 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 AMY1AP04745 511 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 HSPB1P04792 205 aaKnown RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 ANOS1P23352 680 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 IQCJQ1A5X6 159 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 SLC25A28Q96A46 364 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 RTBDNQ9BSG5 229 aaPredicted RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 MDC1Q14676 2089 aaKnown RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 IGHV3-66A0A0C4DH42 116 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 AP4M1O00189 453 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 PHOX2AO14813 284 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 ZP1P60852 638 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 RPUSD1Q9UJJ7 312 aaKnown RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
PKP4-201ENST00000389757 TTC28Q96AY4 2481 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 IGKV1-12A0A0C4DH73 117 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 GOLT1AQ6ZVE7 132 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 TEX45Q8NA69 505 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
PKP4-201ENST00000389757 DIDO1Q9BTC0 2240 aaKnown RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 AKAP6Q13023 2319 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 ESPL1Q14674 2120 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 IGKV1D-13A0A0B4J2D9 117 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 RBFOX2O43251 390 aaKnown RBP eCLIP8.55□□□□□ -1.041e-8■□□□□ 10.8
PKP4-201ENST00000389757 IGKV1-13P0DP09 117 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 MYOD1P15172 320 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 CD69Q07108 199 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 ADIPOQQ15848 244 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 TMEM177Q53S58 311 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 ZNF660Q6AZW8 331 aaPredicted RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 VMO1Q7Z5L0 202 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 CLDN16Q9Y5I7 305 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 TSC2P49815 1807 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 MYO7BQ6PIF6 2116 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 SELLP14151 372 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 CRYBB3P26998 211 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 ITLN2Q8WWU7 325 aaPredicted RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 EFNB1P98172 346 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 FUT9Q9Y231 359 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 SPTAN1Q13813 2472 aaKnown RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 RRHO14718 337 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 UBE2L6O14933 153 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 GCHFRP30047 84 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 SH3BGRL3Q9H299 93 aa8.55□□□□□ -1.04
PKP4-201ENST00000389757 PNRC2Q9NPJ4 139 aaKnown RBP8.55□□□□□ -1.04
PKP4-201ENST00000389757 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 IGFBP2P18065 325 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 CCKARP32238 428 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 FAM209BQ5JX69 171 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 NPCDR1Q9BY65 106 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 LINC00862A6NCI5 91 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 IGHV1-8P0DP01 117 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 MEOX2P50222 304 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 ICAM4Q14773 271 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 ELOBQ15370 118 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 TMEM200BQ69YZ2 307 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
PKP4-201ENST00000389757 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 MOB4Q9Y3A3 225 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 DMRTA2Q96SC8 542 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms