RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TECRQ9NZ01 308 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 IGHV1-45A0A0A0MS14 117 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 CENPWQ5EE01 88 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 TCF24Q7RTU0 167 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 LINC00596Q86U02 117 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 SMIM27A0A1W2PRY6 76 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 G3V4G9 280 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 MPDU1O75352 247 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 GNG4P50150 75 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 FER1L6-AS1Q8NA97 138 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 CPT1CQ8TCG5 803 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 GP6Q9HCN6 339 aa12.17□□□□□ -0.46
VPS9D1-201ENST00000389386 DOCK10Q96BY6 2186 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 CDIPTO14735 213 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 WISP2O76076 250 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 DKK1O94907 266 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 COX6A1P12074 109 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 RPL30P62888 115 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 MIC13Q5XKP0 118 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 NINJ1Q92982 152 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 GOSR1O95249 250 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 PAX2Q02962 417 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 IL11RAQ14626 422 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 PQLC2Q6ZP29 291 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 TNFRSF19Q9NS68 423 aa12.16□□□□□ -0.46
VPS9D1-201ENST00000389386 HELTA6NFD8 242 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 OR4C46A6NHA9 309 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 USF1P22415 310 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 COL8A2P25067 703 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 TREML4Q6UXN2 200 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 MGST2Q99735 147 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
VPS9D1-201ENST00000389386 A0A0G2JMM0 328 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 A0A1W2PPB8 328 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 NTN3O00634 580 aaPredicted RBP12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 ISLRO14498 428 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 AREGP15514 252 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 COLCA1Q6ZS62 124 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 TMEM45BQ96B21 275 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 IMMP1LQ96LU5 166 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 PEF1Q9UBV8 284 aaKnown RBP12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 DNAJC13O75165 2243 aa12.15□□□□□ -0.47
VPS9D1-201ENST00000389386 RAB29O14966 203 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 OR7C2O60412 319 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 FOXH1O75593 365 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 NEURL1O76050 574 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 CD59P13987 128 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 SPATA31B1PQ5VZV4 182 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 DOCK7Q96N67 2140 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 PCBD1P61457 104 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 SLC25A40Q8TBP6 338 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 C5orf30Q96GV9 206 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 ZC2HC1AQ96GY0 325 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 FOXB1Q99853 325 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 PROK2Q9HC23 129 aa12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
VPS9D1-201ENST00000389386 A0A0J9YW62 118 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 hDV102S1A0JD36 115 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 C17orf98A8MV24 154 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 CRXO43186 299 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 RBMXL2O75526 392 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 TNFSF15O95150 251 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 CRYBB3P26998 211 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 LGALS7P47929 136 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 OR1B1Q8NGR6 318 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 ARL2-SNX15V9GYD0 113 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 NCKAP5O14513 1909 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 MED13Q9UHV7 2174 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 EIF4EBP1Q13541 118 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 RPS19BP1Q86WX3 136 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 WIPF2Q8TF74 440 aaPredicted RBP12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 TRAPPC2LQ9UL33 140 aa12.13□□□□□ -0.47
VPS9D1-201ENST00000389386 ZNHIT1O43257 154 aa12.12□□□□□ -0.47
VPS9D1-201ENST00000389386 MT-CO2P00403 227 aa12.12□□□□□ -0.47
VPS9D1-201ENST00000389386 CGAP01215 116 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms