RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
TRAPPC9-201ENST00000389328 PRNTQ86SH4 94 aa11.03□□□□□ -0.64
TRAPPC9-201ENST00000389328 VSTM2AQ8TAG5 236 aa11.03□□□□□ -0.64
TRAPPC9-201ENST00000389328 PERPQ96FX8 193 aa11.03□□□□□ -0.64
TRAPPC9-201ENST00000389328 LINC00470Q9BZP3 86 aa11.03□□□□□ -0.64
TRAPPC9-201ENST00000389328 SNAI2O43623 268 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 NUDT3O95989 172 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 TIMP3P35625 211 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 RSPO1Q2MKA7 263 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 HCP5Q6MZN7 132 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 C12orf54Q6X4T0 127 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 WDR83OSQ9Y284 106 aa11.02□□□□□ -0.64
TRAPPC9-201ENST00000389328 MKRN2OSH3BPM6 223 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 LRRC10Q5BKY1 277 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF497Q6ZNH5 498 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 MUC15Q8N387 334 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 EAF1Q96JC9 268 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 KCNS1Q96KK3 526 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 LILRA1O75019 489 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 OR2J3O76001 311 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 PRSS1P07477 247 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 TDGF1P3P51864 188 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 PSG7Q13046 419 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 PRR31Q5SQ13 230 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 GNB4Q9HAV0 340 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 DCAF16Q9NXF7 216 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 RNF7Q9UBF6 113 aa11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 POLR3KQ9Y2Y1 108 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-201ENST00000389328 CORTO00230 105 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 ACSF3Q4G176 576 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 TMEM177Q53S58 311 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 DNLZQ5SXM8 178 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 C17orf82Q86X59 251 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 NEU1Q99519 415 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 DOCK10Q96BY6 2186 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 TRAV17A0A0B4J275 112 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 RAB37Q96AX2 223 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 SSBP4Q9BWG4 385 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 CACNA1HO95180 2353 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 IGHV3-72A0A0B4J1Y9 119 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 ASCL3Q9NQ33 180 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 K7ESF4 209 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 OR9G9P0C7N8 305 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 NMUP48645 174 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 FOXL1Q12952 345 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 RIGQ13278 110 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 FAM214BQ7L5A3 538 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 DMRTC2Q8IXT2 367 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 AGMATQ9BSE5 352 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 TMEM70Q9BUB7 260 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 RNF115Q9Y4L5 304 aa11.01□□□□□ -0.65
TRAPPC9-201ENST00000389328 WDR87Q6ZQQ6 2873 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 COX7A1P24310 79 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 STXBP6Q8NFX7 210 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ITLN1Q8WWA0 313 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 NPIPB3Q92617 1050 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 NDFIP1Q9BT67 221 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 NGBQ9NPG2 151 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-201ENST00000389328 COMPP49747 757 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-201ENST00000389328 FAM222BQ8WU58 562 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ALKBH7Q9BT30 221 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-201ENST00000389328 JPT1Q9UK76 154 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 A6NDN8 102 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 OR4C46A6NHA9 309 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 FAM157AC9JC47 383 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 CCL8P80075 99 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 SPATA31B1PQ5VZV4 182 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ASCL4Q6XD76 172 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ACP7Q6ZNF0 438 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF703Q9H7S9 590 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-201ENST00000389328 COL4A4P53420 1690 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-201ENST00000389328 FRMPD3Q5JV73 1810 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
TRAPPC9-201ENST00000389328 REG1AP05451 166 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 PMS2CLQ68D20 193 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 GGNQ86UU5 652 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 RNASEH2CQ8TDP1 164 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 PINLYPA6NC86 204 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 LGALS4P56470 323 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 EFNB3Q15768 340 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 ZNF585BQ52M93 769 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 LCN12Q6JVE5 192 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 UNQ5815/PRO19632Q6UWF5 114 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 TREML4Q6UXN2 200 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 PMCHL2Q9BQD1 86 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 DENND4AQ7Z401 1863 aa10.99□□□□□ -0.65
TRAPPC9-201ENST00000389328 PSPNO60542 156 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms