RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 YTHDF2Q9Y5A9 579 aaKnown RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 KNCNA6PVL3 124 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 J3KT08 172 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 CRXO43186 299 aaPredicted RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 CCR2P41597 374 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 RPL23P62829 140 aaKnown RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 CACNG7P62955 275 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 TMEM52Q8NDY8 209 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 PXMP4Q9Y6I8 212 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A10PA6NDY2 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A20PA6NIJ5 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A8PA6NJQ4 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A7PA6NKC0 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A22PA8MWA6 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A12PA8MX19 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A23PA8MXZ1 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A26D6RGX4 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 TIMM23O14925 209 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 RAMP3O60896 148 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 MT-CO3P00414 261 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A13PP0C7W8 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A24PP0C7X0 464 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 FOLR3P41439 243 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 CSN1S1P47710 185 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 IGLV3-21P80748 117 aaPredicted RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 EGR4Q05215 589 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 MMDQ15546 238 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 OR1L3Q8NH93 324 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 ZNF385AQ96PM9 386 aaKnown RBP4.86□□□□□ -1.63
RFC1-202ENST00000381897 GPR35Q9HC97 309 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 TMEM56-RWDD3S4R434 201 aa4.86□□□□□ -1.63
RFC1-202ENST00000381897 TRBV7-9A0A0J9YWB2 115 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 IFITM10A6NMD0 228 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 IL17RELQ6ZVW7 336 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 OR5AS1Q8N127 324 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 OR51G1Q8NGK1 321 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 CLDN23Q96B33 292 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 ARL2-SNX15V9GYD0 113 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 C21orf140B9A014 251 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GP9P14770 177 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 TMEM258P61165 79 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 PLP2Q04941 152 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 LAGE3Q14657 143 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GAPTQ8N292 157 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 PNKDQ8N490 385 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 OR4A5Q8NH83 315 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 TAF15Q92804 592 aaKnown RBP eCLIP4.85□□□□□ -1.63
RFC1-202ENST00000381897 TMEM191AQ9H0A3 160 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 NPIPB6E9PJ23 425 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 RER1O15258 196 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 NPIPB7O75200 414 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 MMP23AO75900 390 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
RFC1-202ENST00000381897 RTL8BQ17RB0 113 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 RSPO4Q2I0M5 234 aaPredicted RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 LRRC75BQ2VPJ9 315 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 ACP7Q6ZNF0 438 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A1Q86YD7 464 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 SFTPA1Q8IWL2 248 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 LSM10Q969L4 123 aaKnown RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 ZNF837Q96EG3 531 aaPredicted RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 MEGF9Q9H1U4 602 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 RPRMQ9NS64 109 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 PLXNA2O75051 1894 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 RBP4P02753 201 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GLRXP35754 106 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GAGE5Q13069 117 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GAGE6Q13070 117 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 FAM78AQ5JUQ0 283 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 FAM90A2PQ658T7 463 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 LINC00596Q86U02 117 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 OR2Y1Q8NGV0 311 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 SLC25A40Q8TBP6 338 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 GABRG3Q99928 467 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 SLC25A33Q9BSK2 321 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 DUSP15Q9H1R2 295 aaPredicted RBP4.85□□□□□ -1.63
RFC1-202ENST00000381897 SCN10AQ9Y5Y9 1956 aa4.85□□□□□ -1.63
RFC1-202ENST00000381897 ATRXP46100 2492 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 WDR87Q6ZQQ6 2873 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 TRAV8-6A0A0B4J262 113 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 A0A1W2PP11 408 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 CCL1P22362 96 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 SSTR5P35346 364 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 MFAP2P55001 183 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 SFTPA2Q8IWL1 248 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 KIR3DL3Q8N743 410 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 OR10V1Q8NGI7 309 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 DEFB126Q9BYW3 111 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 SLC25A39Q9BZJ4 359 aaPredicted RBP4.84□□□□□ -1.63
RFC1-202ENST00000381897 A0A0A6YYD4 124 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 KBTBD11-OT1A0A1B0GTJ5 212 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 A6NDN8 102 aa4.84□□□□□ -1.63
RFC1-202ENST00000381897 MGST1P10620 155 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms