RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
SNPH-202ENST00000381873 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 IGKV3-20P01619 116 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 TRGC2P03986 189 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 GCHFRP30047 84 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 RPRMQ9NS64 109 aa12.56□□□□□ -0.4
SNPH-202ENST00000381873 ZNF98A6NK75 572 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 CD59P13987 128 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
SNPH-202ENST00000381873 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 ELOVL1Q9BW60 279 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 HERPUD1Q15011 391 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 LINC00305Q7Z4B0 112 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 NUDT3O95989 172 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 CDKN1AP38936 164 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
SNPH-202ENST00000381873 IGHV3-49A0A0A0MS15 119 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 C17orf98A8MV24 154 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 FAM74A4Q5TZK3 123 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
SNPH-202ENST00000381873 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 DEPPQ9NTK1 212 aa12.55□□□□□ -0.4
SNPH-202ENST00000381873 FOXI3A8MTJ6 420 aaPredicted RBP12.54□□□□□ -0.4
SNPH-202ENST00000381873 ICAM4Q14773 271 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 GPR82Q96P67 336 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 E9PLN8 166 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 TMEM250H0YL14 139 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 ZIC4Q8N9L1 334 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 VKORC1Q9BQB6 163 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 GGACTQ9BVM4 153 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 PARLQ9H300 379 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 USF3Q68DE3 2245 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 KIF26BQ2KJY2 2108 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 CHD5Q8TDI0 1954 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
SNPH-202ENST00000381873 NEU1Q99519 415 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 A0A0B4J293 547 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 A0A0G2JK05 382 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 NPIPB7O75200 414 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 PRSS2P07478 247 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 KIR2DL4Q99706 377 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 IL6RP08887 468 aaPredicted RBP12.53□□□□□ -0.4
SNPH-202ENST00000381873 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
SNPH-202ENST00000381873 Q5BKY6 102 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 RARRES2Q99969 163 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 TMEM70Q9BUB7 260 aa12.53□□□□□ -0.4
SNPH-202ENST00000381873 MRPL18Q9H0U6 180 aaKnown RBP12.53□□□□□ -0.4
SNPH-202ENST00000381873 TMEM238LA0A1B0GVL6 79 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 A6NJY4 79 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 AMY1AP04745 511 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 COX6CP09669 75 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 PAPPA-AS1Q5QFB9 102 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 PQLC2LA1A4F0 135 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 CD8AP01732 235 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 CCL3L1P16619 93 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 FHITP49789 147 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 ZNF56Q15929 161 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 ARPC1AQ92747 370 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.4
SNPH-202ENST00000381873 FOXA2Q9Y261 457 aaPredicted RBP12.52□□□□□ -0.4
SNPH-202ENST00000381873 S4R3C0 116 aa12.52□□□□□ -0.4
SNPH-202ENST00000381873 TCTAP57738 103 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 PKIAP61925 76 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 ZNF383Q8NA42 475 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 RCC1LQ96I51 464 aaKnown RBP12.52□□□□□ -0.41
SNPH-202ENST00000381873 TUBA4BQ9H853 241 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 CBLN4Q9NTU7 201 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
SNPH-202ENST00000381873 CXorf65A6NEN9 183 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 ZNF207O43670 478 aaKnown RBP12.52□□□□□ -0.41
SNPH-202ENST00000381873 GPR183P32249 361 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 CACNG8Q8WXS5 425 aa12.52□□□□□ -0.41
SNPH-202ENST00000381873 CEACAM4O75871 244 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 IFITM2Q01629 132 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 RAB37Q96AX2 223 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 PRSS8Q16651 343 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 NPCDR1Q9BY65 106 aa12.51□□□□□ -0.41
SNPH-202ENST00000381873 C9JCJ5 164 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 EGR1P18146 543 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 SRIP30626 198 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 LY6DQ14210 128 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms