RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
CTNS-202ENST00000381870 IL19Q9UHD0 177 aa12.4□□□□□ -0.42
CTNS-202ENST00000381870 TRAV8-6A0A0B4J262 113 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 IZUMO1RA6ND01 250 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 OR4C46A6NHA9 309 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 SH2D7A6NKC9 451 aaPredicted RBP12.39□□□□□ -0.43
CTNS-202ENST00000381870 AHRRA9YTQ3 701 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 C12orf77C9JDV5 145 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 ISLRO14498 428 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 MT-CO2P00403 227 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 CD27P26842 260 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 MIR17HGQ75NE6 70 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 OR2Y1Q8NGV0 311 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 HEYLQ9NQ87 328 aaPredicted RBP12.39□□□□□ -0.43
CTNS-202ENST00000381870 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 DNPH1O43598 174 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 AREGP15514 252 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 PSG5Q15238 335 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 GALMQ96C23 342 aa12.39□□□□□ -0.43
CTNS-202ENST00000381870 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
CTNS-202ENST00000381870 CACNA1DQ01668 2161 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 CIDEAO60543 219 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
CTNS-202ENST00000381870 WFDC8Q8IUA0 241 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 SMIM12Q96EX1 92 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 TAAR6Q96RI8 345 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 J3QT63 122 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 M0R1X1 148 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 WDR86Q86TI4 376 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 TMEM70Q9BUB7 260 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 PKIBQ9C010 78 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 KCNIP1Q9NZI2 227 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 LSM4Q9Y4Z0 139 aaKnown RBP12.38□□□□□ -0.43
CTNS-202ENST00000381870 SELENOKQ9Y6D0 94 aa12.38□□□□□ -0.43
CTNS-202ENST00000381870 IGHV3-43A0A0B4J1X8 118 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 RFPL3SP0C7P2 107 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 IGHV3-43DP0DP04 118 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 FAM214BQ7L5A3 538 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 VKORC1L1Q8N0U8 176 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 SMRP1Q8NCR6 262 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 RARRES3Q9UL19 164 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 DEFB108AA8MXU0 73 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 CORTO00230 105 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 PSPNO60542 156 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 HBZP02008 142 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 SSR4P51571 173 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 HOXA4Q00056 320 aaPredicted RBP12.37□□□□□ -0.43
CTNS-202ENST00000381870 WIPI1Q5MNZ9 446 aaPredicted RBP12.37□□□□□ -0.43
CTNS-202ENST00000381870 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 SLC25A45Q8N413 288 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 GUCD1Q96NT3 240 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 SH2D2AQ9NP31 389 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 MPC1Q9Y5U8 109 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
CTNS-202ENST00000381870 GFRA3O60609 400 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 VDAC2P45880 294 aaPredicted RBP12.36□□□□□ -0.43
CTNS-202ENST00000381870 MFAP2P55001 183 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 NXPH1P58417 271 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 FAM120AOSQ5T036 256 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 SLC25A34Q6PIV7 304 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 DMDP11532 3685 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 GGTLC3B5MD39 225 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 KLF5Q13887 457 aaPredicted RBP12.36□□□□□ -0.43
CTNS-202ENST00000381870 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 NINJ1Q92982 152 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 NPVFQ9HCQ7 196 aa12.36□□□□□ -0.43
CTNS-202ENST00000381870 A0A087X0K7 114 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 TRAV3A0A0B4J244 114 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 HSBP1L1C9JCN9 74 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
CTNS-202ENST00000381870 TFF1P04155 84 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 AESQ08117 197 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 C1orf185Q5T7R7 199 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 PRAMEF5Q5TYX0 476 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 SAP30LQ9HAJ7 183 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 FRYLO94915 3013 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 NBEAP1P0C6P0 100 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 FREM2Q5SZK8 3169 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 TEPPQ6URK8 271 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 OR4A16Q8NH70 328 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 Q8TCH9 128 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 ZNF503Q96F45 646 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 ZNF355PQ9NSJ1 428 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 PSG11Q9UQ72 335 aa12.35□□□□□ -0.43
CTNS-202ENST00000381870 CD5LO43866 347 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 FCGR3BO75015 233 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 IGLC1P0CG04 106 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 IGFBP2P18065 325 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms