RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 IGHV3-48P01763 117 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 ARR3P36575 388 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 GPR12P47775 334 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 TMEM136Q6ZRR5 245 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 SAP25Q8TEE9 199 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 KCNS1Q96KK3 526 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 PKIBQ9C010 78 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 AGFG2O95081 481 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 CLDN18P56856 261 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 PLGLB1Q02325 96 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 VAMP3Q15836 100 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 TNXAQ16473 311 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 DEFB127Q9H1M4 99 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
EIF3CL-201ENST00000380876 CER1O95813 267 aa11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 TSPOP30536 169 aa11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 OPRK1P41145 380 aa11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 Q0VG73 95 aa11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 C22orf15Q8WYQ4 148 aa11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 ALKBH7Q9BT30 221 aaPredicted RBP11.15□□□□□ -0.63
EIF3CL-201ENST00000380876 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 USF1P22415 310 aaPredicted RBP11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 FABP6P51161 128 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 OR1C1Q15619 314 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 TAAR6Q96RI8 345 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 SFXN3Q9BWM7 321 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 POLDIP2Q9Y2S7 368 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 GFRA3O60609 400 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 SLC24A4Q8NFF2 622 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 PLEKHA3Q9HB20 300 aa11.14□□□□□ -0.63
EIF3CL-201ENST00000380876 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 OOEPA6NGQ2 149 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 EIF4EBP1Q13541 118 aaPredicted RBP11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 STUMQ69YW2 141 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 LOXL4Q96JB6 756 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 DUSP23Q9BVJ7 150 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 YLPM1P49750 1951 aaKnown RBP11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 NKX6-3A6NJ46 265 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 ESDP10768 282 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 C1orf229Q6ZS94 237 aaPredicted RBP11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 CDX2Q99626 313 aaPredicted RBP11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 PCED1AQ9H1Q7 454 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
EIF3CL-201ENST00000380876 HSBP1O75506 76 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 CRYABP02511 175 aaKnown RBP11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 APCSP02743 223 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 PRRX1P54821 245 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 ZNF146Q15072 292 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 RAB30Q15771 203 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 RAB1CQ92928 201 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TMEM45BQ96B21 275 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 KALRNO60229 2985 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 M0R2Z0 102 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 IGLL1P15814 213 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 ZNF134P52741 427 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 RHOBP62745 196 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 ARG2P78540 354 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 IL11RAQ14626 422 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 LPAL2Q16609 132 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TIGITQ495A1 244 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 EBLN2Q6P2I7 272 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 GNB1LQ9BYB4 327 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 RPH3ALQ9UNE2 315 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TCF19Q9Y242 345 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 DUTP33316 252 aaKnown RBP11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 MFAP2P55001 183 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TCTAP57738 103 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 CX3CL1P78423 397 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 DCAF12Q5T6F0 453 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 PMCHL2Q9BQD1 86 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
EIF3CL-201ENST00000380876 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 LNP1A1A4G5 178 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 DUSP3P51452 185 aaPredicted RBP11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 TRAT1Q6PIZ9 186 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 BET1LQ9NYM9 111 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 BOKQ9UMX3 212 aaPredicted RBP11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
EIF3CL-201ENST00000380876 SMPD2O60906 423 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms