RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 C1orf159Q96HA4 380 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 ACTR3CQ9C0K3 210 aaPredicted RBP15.58■□□□□ 0.08
GMDS-201ENST00000380805 NPVFQ9HCQ7 196 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 NDUFA4L2Q9NRX3 87 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 GNG13Q9P2W3 67 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 TNCP24821 2201 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 MALRD1Q5VYJ5 2156 aa15.58■□□□□ 0.08
GMDS-201ENST00000380805 A0A1W2PPR1 153 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 IFNA1P01562 189 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 IFNA4P05014 189 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 TAGLN2P37802 199 aaKnown RBP15.57■□□□□ 0.08
GMDS-201ENST00000380805 PRRX1P54821 245 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 RPL8P62917 257 aaKnown RBP15.57■□□□□ 0.08
GMDS-201ENST00000380805 ARSJQ5FYB0 599 aaPredicted RBP15.57■□□□□ 0.08
GMDS-201ENST00000380805 OR1L8Q8NGR8 309 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 MGST2Q99735 147 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 GGTLC1Q9BX51 225 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 CLEC7AQ9BXN2 247 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 TUBA4BQ9H853 241 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 CHODLQ9H9P2 273 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 KCNIP2Q9NS61 270 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 C7orf77A4D0Y5 90 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 FGF8P55075 233 aaPredicted RBP15.57■□□□□ 0.08
GMDS-201ENST00000380805 CYB561D1Q8N8Q1 229 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 SMCO4Q9NRQ5 59 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 VAX2Q9UIW0 290 aa15.57■□□□□ 0.08
GMDS-201ENST00000380805 HELZ2Q9BYK8 2649 aaKnown RBP15.56■□□□□ 0.08
GMDS-201ENST00000380805 CYB5BO43169 146 aa15.56■□□□□ 0.08
GMDS-201ENST00000380805 LIPFP07098 398 aa15.56■□□□□ 0.08
GMDS-201ENST00000380805 LGALS7P47929 136 aa15.56■□□□□ 0.08
GMDS-201ENST00000380805 SLC25A22Q9H936 323 aa15.56■□□□□ 0.08
GMDS-201ENST00000380805 PATZ1Q9HBE1 687 aaKnown RBP15.56■□□□□ 0.08
GMDS-201ENST00000380805 hCG_1809904A0A1W2PP81 198 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 A0A1W2PPE2 198 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 A0A1W2PR64 198 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 A0A1W2PRV1 198 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 IGFBP2P18065 325 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 RBMS3Q6XE24 437 aaKnown RBP15.55■□□□□ 0.08
GMDS-201ENST00000380805 RAB24Q969Q5 203 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 COMMD5Q9GZQ3 224 aa15.55■□□□□ 0.08
GMDS-201ENST00000380805 SPTBN1Q01082 2364 aaKnown RBP15.55■□□□□ 0.08
GMDS-201ENST00000380805 ZFP92A6NM28 416 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 C22orf46C9J442 243 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 BUB1B-PAK6H3BSN5 160 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 LY6HO94772 140 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 YIF1AO95070 293 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 RNASE2P10153 161 aaKnown RBP15.54■□□□□ 0.08
GMDS-201ENST00000380805 HNF4GQ14541 408 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 FAM90A2PQ658T7 463 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 A0A1W2PN81 502 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 SMCO3A2RU48 225 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 A6NNC1 897 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 ATF4P18848 351 aaPredicted RBP15.54■□□□□ 0.08
GMDS-201ENST00000380805 CHRNA7P36544 502 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 CDC34P49427 236 aaPredicted RBP15.54■□□□□ 0.08
GMDS-201ENST00000380805 VMA21Q3ZAQ7 101 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 FAM122CQ6P4D5 195 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 TEPPQ6URK8 271 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 OR4P4Q8NGL7 312 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 HINT2Q9BX68 163 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 MANBALQ9NQG1 85 aa15.54■□□□□ 0.08
GMDS-201ENST00000380805 AMMECR1Q9Y4X0 333 aaPredicted RBP15.54■□□□□ 0.08
GMDS-201ENST00000380805 CGB1A6NKQ9 187 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 H3BQ15 152 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 LY6LH3BQJ8 138 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 FBP1P09467 338 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 MRGPRG-AS1Q2M3A8 158 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 SLC35E3Q7Z769 313 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 C15orf54Q8N8G6 183 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 RPS10P5Q9NQ39 176 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 PXMP4Q9Y6I8 212 aa15.53■□□□□ 0.08
GMDS-201ENST00000380805 HRNRQ86YZ3 2850 aaPredicted RBP15.52■□□□□ 0.08
GMDS-201ENST00000380805 M0R036 132 aa15.52■□□□□ 0.08
GMDS-201ENST00000380805 M0R1W7 72 aa15.52■□□□□ 0.08
GMDS-201ENST00000380805 RPL29P47914 159 aaKnown RBP15.52■□□□□ 0.08
GMDS-201ENST00000380805 TEX45Q8NA69 505 aa15.52■□□□□ 0.08
GMDS-201ENST00000380805 GCN1Q92616 2671 aaKnown RBP15.52■□□□□ 0.07
GMDS-201ENST00000380805 IGHV1-3A0A0C4DH29 117 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 COLCA2A8K830 154 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 CRYGBP07316 175 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 SNRNP70P08621 437 aaKnown RBP15.51■□□□□ 0.07
GMDS-201ENST00000380805 MEF2BQ02080 365 aaPredicted RBP15.51■□□□□ 0.07
GMDS-201ENST00000380805 TMEM144Q7Z5S9 345 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 OR11H6Q8NGC7 330 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 ZNF430Q9H8G1 570 aaPredicted RBP15.51■□□□□ 0.07
GMDS-201ENST00000380805 PUS1Q9Y606 427 aaKnown RBP eCLIP15.51■□□□□ 0.07
GMDS-201ENST00000380805 UTP20O75691 2785 aaKnown RBP15.51■□□□□ 0.07
GMDS-201ENST00000380805 OPN1MWP04001 364 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 OPN1MW2P0DN77 364 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 OPN1MW3P0DN78 364 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PSMB3P49720 205 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PRR20EP86478 221 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PRR20CP86479 221 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PRR20DP86480 221 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PRR20BP86481 221 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 PRR20AP86496 221 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 NIPSNAP3BQ9BS92 247 aa15.51■□□□□ 0.07
GMDS-201ENST00000380805 SSBP3Q9BWW4 388 aaPredicted RBP15.51■□□□□ 0.07
GMDS-201ENST00000380805 DOPEY1Q5JWR5 2465 aa15.5■□□□□ 0.07
GMDS-201ENST00000380805 A0A087WWC5 75 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms