RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C7orf71A4D174 169 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 BIVMQ86UB2 503 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 NPIPB7O75200 414 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-202ENST00000380518 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 TRAV14DV4A0A0A6YYC5 116 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 LTBRP36941 435 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 ZNF56Q15929 161 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 FAM201AQ5SY85 155 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.24
COL2A1-202ENST00000380518 GFRA3O60609 400 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 COPS9Q8WXC6 57 aa13.52□□□□□ -0.24
COL2A1-202ENST00000380518 TRBV6-7A0A0A0MS04 114 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 IGHV1-2P23083 117 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 ATOH7Q8N100 152 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 ZNF525Q8N782 197 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 WBP1Q96G27 269 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 INTS1Q8N201 2190 aaKnown RBP13.52□□□□□ -0.25
COL2A1-202ENST00000380518 PEX7O00628 323 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 TRGV3P03979 118 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 MOB4Q9Y3A3 225 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 CACNA1DQ01668 2161 aa13.52□□□□□ -0.25
COL2A1-202ENST00000380518 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 LOC102723996A0A087X1L8 192 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 UMODP07911 640 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 DCTN5Q9BTE1 182 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 ZNF646O15015 1829 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 JOSD1Q15040 202 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 RNASEH2CQ8TDP1 164 aaKnown RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 WDYHV1Q96HA8 205 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 OR11H12B2RN74 326 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 TBR1Q16650 682 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 OR11H1Q8NG94 326 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 OR11H2Q8NH07 326 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 C21orf62Q9NYP8 219 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 RGPD3A6NKT7 1758 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 CENPVQ7Z7K6 275 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 RTN4RL2Q86UN3 420 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 OR52E5Q8NH55 327 aa13.51□□□□□ -0.25
COL2A1-202ENST00000380518 NEU4Q8WWR8 484 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-202ENST00000380518 TMEM136Q6ZRR5 245 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
COL2A1-202ENST00000380518 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
COL2A1-202ENST00000380518 A0A087WWC5 75 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 SLC17A3O00476 420 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 BTCP35070 178 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 FAM57AQ8TBR7 257 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 ZNF414Q96IQ9 312 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 EFEMP2O95967 443 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 IGLV3-32A0A0A0MS00 114 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 TRAV24A0A0B4J272 114 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 SCO2A0A1W2PP80 73 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 LYPD3O95274 346 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 CCL1P22362 96 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 C21orf62-AS1Q17RA5 79 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 GTF3AQ92664 365 aaKnown RBP13.5□□□□□ -0.25
COL2A1-202ENST00000380518 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
COL2A1-202ENST00000380518 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-202ENST00000380518 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 MRPL20Q9BYC9 149 aaKnown RBP13.49□□□□□ -0.25
COL2A1-202ENST00000380518 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-202ENST00000380518 IGHV3OR16-10A0A075B7F0 116 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 ARL6IP6Q8N6S5 226 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 PLPPR1Q8TBJ4 325 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 SDF2L1Q9HCN8 221 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 HEATR5BQ9P2D3 2071 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV1-9A0A0C4DH69 117 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 ATP5G3P48201 142 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 C17orf100A8MU93 164 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 LHX2P50458 406 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 SPTBN1Q01082 2364 aaKnown RBP13.49□□□□□ -0.25
COL2A1-202ENST00000380518 ABCA7Q8IZY2 2146 aa13.49□□□□□ -0.25
COL2A1-202ENST00000380518 LINC00271P0C7V0 271 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 TAS2R60P59551 318 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 TMEM144Q7Z5S9 345 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 CCL19Q99731 98 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 CEACAM4O75871 244 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 PPP1R17O96001 155 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 WDR82Q6UXN9 313 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 REC114Q7Z4M0 266 aa13.48□□□□□ -0.25
COL2A1-202ENST00000380518 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms