RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SRSF8Q9BRL6 282 aaKnown RBP19.61■□□□□ 0.73
ECHDC3-201ENST00000379215 RGS13O14921 159 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 DFFBO76075 338 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 CST7O76096 145 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 METTL15P1P0C7V9 234 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 TPT1P13693 172 aaKnown RBP19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 HTR2BP41595 481 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 TMEM267Q0VDI3 215 aaPredicted RBP19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 SLC24A4Q8NFF2 622 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 PINX1Q96BK5 328 aaKnown RBP19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 OR4C12Q96R67 309 aa19.6■□□□□ 0.73
ECHDC3-201ENST00000379215 IFNA7P01567 189 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 OPN1MWP04001 364 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 OR8U8P0C7N1 319 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 OPN1MW2P0DN77 364 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 OPN1MW3P0DN78 364 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 MYOD1P15172 320 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 IFITM2Q01629 132 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 PJVKQ0ZLH3 352 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 FAM120AOSQ5T036 256 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 TEX261Q6UWH6 196 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 ZNF767PQ75MW2 155 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 OR5C1Q8NGR4 320 aa19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 PAIP2BQ9ULR5 123 aaKnown RBP19.59■□□□□ 0.73
ECHDC3-201ENST00000379215 TMEM217Q8N7C4 229 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 OR10P1Q8NGE3 313 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 ST8SIA2Q92186 375 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 SSX3Q99909 188 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 SMIM3Q9BZL3 60 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 CYTL1Q9NRR1 136 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 PITPNC1Q9UKF7 332 aa19.58■□□□□ 0.73
ECHDC3-201ENST00000379215 CD5LO43866 347 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 CA2P00918 260 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 NPY1RP25929 384 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 SNCAP37840 140 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 GNB1P62873 340 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 ATP6V1FQ16864 119 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 UBAC2Q8NBM4 344 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 PHYHIPLQ96FC7 376 aa19.58■□□□□ 0.72
ECHDC3-201ENST00000379215 ITPR2Q14571 2701 aa19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 C15orf62A8K5M9 175 aa19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 CNIH1O95406 144 aa19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 SUB1P53999 127 aaKnown RBP eCLIP19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 ATP5SQ99766 215 aa19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 RASL11BQ9BPW5 248 aa19.57■□□□□ 0.72
ECHDC3-201ENST00000379215 MAP1AP78559 2803 aaPredicted RBP19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 C10orf55Q5SWW7 151 aa19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 EIF5AL1Q6IS14 154 aaKnown RBP19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 CLEC9AQ6UXN8 241 aa19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 ZNF562Q6V9R5 426 aa19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 LILRB2Q8N423 598 aa19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 SRSF12Q8WXF0 261 aaKnown RBP19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 RBM14Q96PK6 669 aaKnown RBP19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 MOB4Q9Y3A3 225 aa19.56■□□□□ 0.72
ECHDC3-201ENST00000379215 FGF16O43320 207 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 CLINT1Q14677 625 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 C2orf83Q53S99 150 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 BAP18Q8IXM2 172 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 Q8N9W7 124 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 BSCL2Q96G97 398 aaPredicted RBP19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 CCDC168Q8NDH2 2452 aa19.55■□□□□ 0.72
ECHDC3-201ENST00000379215 HLA-DRB1P01911 266 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 SLC38A11Q08AI6 406 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 BSXQ3C1V8 233 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 FBLN7Q53RD9 439 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 RPL7L1Q6DKI1 246 aaKnown RBP19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 OR8G2PQ6IF36 304 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 C16orf82Q7Z2V1 217 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 ZNF680Q8NEM1 530 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 PIFOQ8TCI5 191 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 SLC25A33Q9BSK2 321 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 GGACTQ9BVM4 153 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 CGB1A6NKQ9 187 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 PMS2P5A8MQ11 134 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 M0QZK8 103 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 FCN1O00602 326 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 ETV3LQ6ZN32 361 aa19.54■□□□□ 0.72
ECHDC3-201ENST00000379215 E7EUB6 86 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 H3BUX3 64 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 IFNA5P01569 189 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 IFNA4P05014 189 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 FXYD3Q14802 87 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 ZNF114Q8NC26 417 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 OR10W1Q8NGF6 305 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 OR5R1Q8NH85 324 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 UBQLN2Q9UHD9 624 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 ITPR3Q14573 2671 aa19.53■□□□□ 0.72
ECHDC3-201ENST00000379215 IGLC7A0M8Q6 106 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 OR13C7P0DN81 318 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 WT1-ASQ06250 92 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 DEFB112Q30KQ8 113 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 HAPLN4Q86UW8 402 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 ARPC1AQ92747 370 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 TMEM147Q9BVK8 224 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 WFDC1Q9HC57 220 aa19.52■□□□□ 0.72
ECHDC3-201ENST00000379215 TSPAN9O75954 239 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 RNASE2P10153 161 aaKnown RBP19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 SSBP2P81877 361 aaPredicted RBP19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 ARL16Q0P5N6 197 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 EXOSC2Q13868 293 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms