RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 LAMB4A4D0S4 1761 aa11.33□□□□□ -0.6
HIPK3-202ENST00000379016 IGLV3-10A0A075B6K4 115 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 DYSFO75923 2080 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 CEP250Q9BV73 2442 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 C12orf73Q69YU5 71 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 SPTA1P02549 2419 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 TRAV5A0A0B4J249 113 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 H0Y980 276 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 ORMDL3Q8N138 153 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 MAJINQ3KP22 176 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM91Q6ZNR0 172 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 DNAJC30Q96LL9 226 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 SMCHD1A6NHR9 2005 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 NR2C2APQ86WQ0 139 aa11.32□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF79Q15937 498 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 TBR1Q16650 682 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 NDUFA2O43678 99 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
HIPK3-202ENST00000379016 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
HIPK3-202ENST00000379016 ODAMA1E959 279 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 TPTE2P1Q5T6R2 138 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 KLK13Q9UKR3 277 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 DPM2O94777 84 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 LIFP15018 202 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 STPG1Q5TH74 334 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 C21orf62Q9NYP8 219 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
HIPK3-202ENST00000379016 UPK3AO75631 287 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
HIPK3-202ENST00000379016 EGR4Q05215 589 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 RIMKLAQ8IXN7 391 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 CRIM1Q9NZV1 1036 aa11.31□□□□□ -0.6
HIPK3-202ENST00000379016 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 CA11O75493 328 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF250P15622 560 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 CGAP01215 116 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 CACNA1IQ9P0X4 2223 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 SRSF1Q07955 248 aaKnown RBP eCLIP11.3□□□□□ -0.6
HIPK3-202ENST00000379016 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 FGF12P61328 243 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF703Q9H7S9 590 aaPredicted RBP11.3□□□□□ -0.6
HIPK3-202ENST00000379016 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
HIPK3-202ENST00000379016 FAM60AQ9NP50 221 aa11.3□□□□□ -0.6
HIPK3-202ENST00000379016 TRAV9-2A0A087WT02 112 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 LEPROTO15243 131 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM258P61165 79 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 DUTP33316 252 aaKnown RBP11.29□□□□□ -0.6
HIPK3-202ENST00000379016 SEC11AP67812 179 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 GAGE13Q4V321 117 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 ECM29Q5VYK3 1845 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 C22orf46C9J442 243 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 SCAND1P57086 179 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 STPG2Q8N412 459 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 GCHFRP30047 84 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
HIPK3-202ENST00000379016 LINC00299Q6ZSB3 139 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 IFNL4K9M1U5 179 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 IGLV3-27P01718 113 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 MYOD1P15172 320 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 CDC42EP2O14613 210 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ADMP35318 185 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 HRKO00198 91 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 PSG4Q00888 419 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF146Q15072 292 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ATP1A1-AS1Q5TC04 95 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 CD24P25063 80 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 ZNF345Q14585 488 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 UBE2E2Q96LR5 201 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
HIPK3-202ENST00000379016 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
HIPK3-202ENST00000379016 CELA2AP08217 269 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms