RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GALNT14Q96FL9 552 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 ACTR3CQ9C0K3 210 aaPredicted RBP6.66□□□□□ -1.34
CKAP2-203ENST00000378037 FBLN5Q9UBX5 448 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 MFSD2BA6NFX1 497 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 C11orf94C9JXX5 98 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 H3BQ15 152 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 H7BYZ3 331 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 CGAP01215 116 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 CD200P41217 278 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 CAMPP49913 170 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 RPL8P62917 257 aaKnown RBP6.66□□□□□ -1.34
CKAP2-203ENST00000378037 DLK1P80370 383 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 ZNF383Q8NA42 475 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 RCC1LQ96I51 464 aaKnown RBP6.66□□□□□ -1.34
CKAP2-203ENST00000378037 GAFA1Q96PS6 74 aa6.66□□□□□ -1.34
CKAP2-203ENST00000378037 TRAV5A0A0B4J249 113 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 LINC00862A6NCI5 91 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 HPRT1P00492 218 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 FAM157CP0CG43 387 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 ZP3P21754 424 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 IL3RAP26951 378 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 ATP5G3P48201 142 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 RAB7AP51149 207 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.34
CKAP2-203ENST00000378037 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 SAXO1Q8IYX7 474 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 C1orf162Q8NEQ5 155 aaPredicted RBP6.65□□□□□ -1.34
CKAP2-203ENST00000378037 LFNGQ8NES3 379 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 C18orf12Q96KH6 178 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 SSBP3Q9BWW4 388 aaPredicted RBP6.65□□□□□ -1.34
CKAP2-203ENST00000378037 CTSZQ9UBR2 303 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 HAX1O00165 279 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 TIMM23O14925 209 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 TGOLN2O43493 480 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 ARL14EPLP0DKL9 152 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 RPP30P78346 268 aaKnown RBP6.65□□□□□ -1.34
CKAP2-203ENST00000378037 RUSC1-AS1Q66K80 236 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 GP6Q9HCN6 339 aa6.65□□□□□ -1.34
CKAP2-203ENST00000378037 LOC105371242A0A075B767 164 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM178BH3BS89 294 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 CRYBA1P05813 215 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 LINC00869P0C866 280 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 FABP4P15090 132 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 RAB5BP61020 215 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 IL17RELQ6ZVW7 336 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 TMEM147Q9BVK8 224 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 SLC35B3Q9H1N7 401 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 FBN2P35556 2912 aa6.65□□□□□ -1.35
CKAP2-203ENST00000378037 SRRM4A7MD48 611 aaKnown RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 C19orf84I3L1E1 186 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CA11O75493 328 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 OR2J3O76001 311 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 AREGP15514 252 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 SULT1A2P50226 295 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF345Q14585 488 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 ACOT6Q3I5F7 207 aaPredicted RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF561Q8N587 486 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 SSC4DQ8WTU2 575 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 RITA1Q96K30 269 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 RBM14Q96PK6 669 aaKnown RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 RAB9BQ9NP90 201 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 TRAV40A0A0B4J280 105 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 B9A039 149 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 F2RL2O00254 374 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 MT-CO2P00403 227 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 PYYP10082 97 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 SPP1P10451 314 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 SRD5A1P18405 259 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CA7P43166 264 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CD81P60033 236 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 FLI1Q01543 452 aaPredicted RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 DMRTA1Q5VZB9 504 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 RBMS3Q6XE24 437 aaKnown RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 SLC16A13Q7RTY0 426 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF329Q86UD4 541 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CIB3Q96Q77 187 aaPredicted RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 RAB19A4D1S5 217 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 FCN1O00602 326 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 TGFAP01135 160 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CLEC3BP05452 202 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
CKAP2-203ENST00000378037 OR5I1Q13606 314 aa6.64□□□□□ -1.35
CKAP2-203ENST00000378037 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HBE1P02100 147 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 NTF3P20783 257 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HTR1DP28221 377 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
CKAP2-203ENST00000378037 PRRX1P54821 245 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 HTD2P86397 168 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 ZNF90Q03938 601 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
CKAP2-203ENST00000378037 OR4D5Q8NGN0 318 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms