RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ESPL1Q14674 2120 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 GPX4P36969 197 aaPredicted RBP16.45■□□□□ 0.22
PCDH8-202ENST00000377942 LINC00305Q7Z4B0 112 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 OR4B1Q8NGF8 309 aa16.45■□□□□ 0.22
PCDH8-202ENST00000377942 PNRC2Q9NPJ4 139 aaKnown RBP16.45■□□□□ 0.22
PCDH8-202ENST00000377942 IGKV1-12A0A0C4DH73 117 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 IGKV1D-12P01611 117 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 HLA-DQA1P01909 254 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 RPRMQ9NS64 109 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 CRYBB3P26998 211 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 HIST1H2BAQ96A08 127 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 TICRRQ7Z2Z1 1910 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 IGKV1D-13A0A0B4J2D9 117 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 ETV2O00321 342 aaPredicted RBP16.44■□□□□ 0.22
PCDH8-202ENST00000377942 IGKV1-13P0DP09 117 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 GFI1Q99684 422 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 OR4X2Q8NGF9 303 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 CLDND2Q8NHS1 167 aa16.44■□□□□ 0.22
PCDH8-202ENST00000377942 PF4P02776 101 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 SAA1P0DJI8 122 aaPredicted RBP16.43■□□□□ 0.22
PCDH8-202ENST00000377942 SRSF6Q13247 344 aaKnown RBP16.43■□□□□ 0.22
PCDH8-202ENST00000377942 RRN3P1Q2M238 152 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 TEX45Q8NA69 505 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 DUX5Q96PT3 197 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 NPFFR1Q9GZQ6 430 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 IGHV3-48P01763 117 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 FAM90A9PA6NNJ1 464 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 C18orf12Q96KH6 178 aa16.43■□□□□ 0.22
PCDH8-202ENST00000377942 CXorf65A6NEN9 183 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 ZNF324BQ6AW86 544 aaPredicted RBP16.42■□□□□ 0.22
PCDH8-202ENST00000377942 JMJD8Q96S16 334 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 CX3CL1P78423 397 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 TMEM177Q53S58 311 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 TMEM42Q69YG0 159 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 RCC1LQ96I51 464 aaKnown RBP16.42■□□□□ 0.22
PCDH8-202ENST00000377942 RPUSD1Q9UJJ7 312 aaKnown RBP16.42■□□□□ 0.22
PCDH8-202ENST00000377942 OTX1P32242 354 aaPredicted RBP16.42■□□□□ 0.22
PCDH8-202ENST00000377942 ZNF343Q6P1L6 599 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 A0A0A6YYD4 124 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 LYNX1G3V0Z9 82 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 LYNX1P0DP58 116 aa16.42■□□□□ 0.22
PCDH8-202ENST00000377942 MED12Q93074 2177 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 MSGN1A6NI15 193 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 CGB1A6NKQ9 187 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 C15orf61A6NNL5 157 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 VAMP3Q15836 100 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 SMUG1Q53HV7 270 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 IGFL3Q6UXB1 125 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 GCGP01275 180 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 GPX1P07203 203 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 ANOS1P23352 680 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 YAE1D1Q9NRH1 226 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 J3QR89 54 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 FAM209BQ5JX69 171 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 TMEM144Q7Z5S9 345 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 PACRGQ96M98 296 aaPredicted RBP16.41■□□□□ 0.22
PCDH8-202ENST00000377942 GNLYP22749 145 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 ZNF506Q5JVG8 444 aa16.41■□□□□ 0.22
PCDH8-202ENST00000377942 DUTP33316 252 aaKnown RBP16.4■□□□□ 0.22
PCDH8-202ENST00000377942 NBL1P41271 181 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 PUSL1Q8N0Z8 303 aaKnown RBP16.4■□□□□ 0.22
PCDH8-202ENST00000377942 WNT10AQ9GZT5 417 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 FOXA2Q9Y261 457 aaPredicted RBP16.4■□□□□ 0.22
PCDH8-202ENST00000377942 PHLDA3Q9Y5J5 127 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 IGFBP2P18065 325 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 NCMAPQ5T1S8 102 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 SAMD13Q5VXD3 122 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 DOCK8Q8NF50 2099 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 NPIPB6E9PJ23 425 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 RRHO14718 337 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 CD99P14209 185 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 PARLQ9H300 379 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 TMEM178BH3BS89 294 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 LDLRAD4O15165 306 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 F12P00748 615 aaPredicted RBP16.4■□□□□ 0.22
PCDH8-202ENST00000377942 HEPN1Q6WQI6 88 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 GOLT1AQ6ZVE7 132 aa16.4■□□□□ 0.22
PCDH8-202ENST00000377942 SRSF12Q8WXF0 261 aaKnown RBP16.4■□□□□ 0.22
PCDH8-202ENST00000377942 IGHV3-35A0A0C4DH35 117 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 BTCP35070 178 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 VENTXO95231 258 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 RARRES2Q99969 163 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 PRSS22Q9GZN4 317 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 FOSL1P15407 271 aa16.39■□□□□ 0.21
PCDH8-202ENST00000377942 CKS2P33552 79 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 COLCA1Q6ZS62 124 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 ZNF525Q8N782 197 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 MEOX2P50222 304 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 CD81P60033 236 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 OOSP1A8MZH6 123 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 TRGC1P0CF51 173 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 AGAP20933 346 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 LRTM2Q8N967 370 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 IGKV1-27A0A075B6S5 117 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 M0R143 59 aa16.38■□□□□ 0.21
PCDH8-202ENST00000377942 COL6A6A6NMZ7 2263 aa16.37■□□□□ 0.21
PCDH8-202ENST00000377942 GPR183P32249 361 aa16.37■□□□□ 0.21
PCDH8-202ENST00000377942 SCGB1C2P0DMR2 95 aa16.37■□□□□ 0.21
PCDH8-202ENST00000377942 FHITP49789 147 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms