RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 RNASEH2CQ8TDP1 164 aaKnown RBP14.98□□□□□ -0.01
CLSTN1-202ENST00000377298 SAA2-SAA4A0A096LPE2 208 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 SAA2P0DJI9 122 aaPredicted RBP14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 GCHFRP30047 84 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 WFIKKN1Q96NZ8 548 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 CRYBB3P26998 211 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 B3GALT5-AS1P59052 145 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 C2orf68Q2NKX9 166 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 LINC00305Q7Z4B0 112 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 OR4C5Q8NGB2 326 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 NPCDR1Q9BY65 106 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 IGHV3-35A0A0C4DH35 117 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 SRRM5B3KS81 715 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 CDC42EP3Q9UKI2 254 aa14.97□□□□□ -0.01
CLSTN1-202ENST00000377298 RNF224P0DH78 156 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 PAQR4Q8N4S7 273 aaPredicted RBP14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 KLHDC3Q9BQ90 382 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 NBR2O15453 112 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 CRXO43186 299 aaPredicted RBP14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 IGKV3-15P01624 115 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 ST6GALNAC3Q8NDV1 305 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 AKAP6Q13023 2319 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 CBY3A6NI87 242 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 M0QZK8 103 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 RBFOX2O43251 390 aaKnown RBP eCLIP14.96□□□□□ -0.014e-6■■□□□ 12.8
CLSTN1-202ENST00000377298 BTCP35070 178 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 DSCR9P59020 149 aa14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 TCF20Q9UGU0 1960 aaKnown RBP14.96□□□□□ -0.01
CLSTN1-202ENST00000377298 TRAV34A0A0B4J273 112 aa14.96□□□□□ -0.02
CLSTN1-202ENST00000377298 J3QR89 54 aa14.96□□□□□ -0.02
CLSTN1-202ENST00000377298 CX3CL1P78423 397 aa14.96□□□□□ -0.02
CLSTN1-202ENST00000377298 TMEM177Q53S58 311 aa14.96□□□□□ -0.02
CLSTN1-202ENST00000377298 FAM209BQ5JX69 171 aa14.96□□□□□ -0.02
CLSTN1-202ENST00000377298 LYNX1G3V0Z9 82 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 LYNX1P0DP58 116 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 SRSF6Q13247 344 aaKnown RBP14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 AMMECR1LQ6DCA0 310 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 TNFRSF14Q92956 283 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 GPX1P07203 203 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 CA7P43166 264 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 UPK2O00526 184 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 HLA-DQA1P01909 254 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 RPRMQ9NS64 109 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 EIF3GO75821 320 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 SAA1P0DJI8 122 aaPredicted RBP14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 ZNF672Q499Z4 452 aaPredicted RBP14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 CLDND2Q8NHS1 167 aa14.95□□□□□ -0.02
CLSTN1-202ENST00000377298 IGKV1D-13A0A0B4J2D9 117 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 NPIPB6E9PJ23 425 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 TRGC2P03986 189 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 IGKV1-13P0DP09 117 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 ANOS1P23352 680 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 SAPCD1Q5SSQ6 148 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 GLRX5Q86SX6 157 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 METRNQ9UJH8 293 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 PHLDA3Q9Y5J5 127 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 HEATR5BQ9P2D3 2071 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 A0A0G2JNJ9 132 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 Q9UFV3 132 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 CACNA1BQ00975 2339 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 UBE2L6O14933 153 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 NPFFR1Q9GZQ6 430 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 TMEM250H0YL14 139 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 H3BTX0 84 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 RRHO14718 337 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 EFNA4P52798 201 aa14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 FOXA2Q9Y261 457 aaPredicted RBP14.94□□□□□ -0.02
CLSTN1-202ENST00000377298 MSGN1A6NI15 193 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 GGCTO75223 188 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 SRSF7Q16629 238 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 HIST1H2BAQ96A08 127 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 RARRES2Q99969 163 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 IGKV1-12A0A0C4DH73 117 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 IGKV1D-12P01611 117 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 CD99P14209 185 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 NUTF2P61970 127 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 ZNF343Q6P1L6 599 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 C20orf204Q6ZNR8 217 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 GOLT1AQ6ZVE7 132 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 AP5S1Q9NUS5 200 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 PI4KAP42356 2102 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 GCGP01275 180 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 PLA2G2CQ5R387 149 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 RCC1LQ96I51 464 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 MPZP25189 248 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 SCGB1D4Q6XE38 83 aa14.93□□□□□ -0.02
CLSTN1-202ENST00000377298 GNLYP22749 145 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 CKS2P33552 79 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 LY6G6EA0A0G2JKS1 128 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 NBEAP1P0C6P0 100 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 IGFBP2P18065 325 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 MDKP21741 143 aaPredicted RBP14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 RELBQ01201 579 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 OR8A1Q8NGG7 326 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 SRSF12Q8WXF0 261 aaKnown RBP14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 U3KQA8 63 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 GPX4P36969 197 aaPredicted RBP14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 FHITP49789 147 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 WNT10AQ9GZT5 417 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 PARLQ9H300 379 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms