RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TEX50A0A1B0GTY4 177 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 A0A1B0GW64 132 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 CGB1A6NKQ9 187 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 H3BUX3 64 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 GPR137BO60478 399 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 TSC22D2O75157 780 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 CA2P00918 260 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 OPN1MWP04001 364 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 RPL12P30050 165 aaKnown RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 MAS1LP35410 378 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 VDAC2P45880 294 aaPredicted RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 HOXA1P49639 335 aaPredicted RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 COMPP49747 757 aaPredicted RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 CAV2P51636 162 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 OR2F1Q13607 317 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 PLGLAQ15195 96 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 AANATQ16613 207 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 IL17RELQ6ZVW7 336 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 TMUB2Q71RG4 321 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 OR8H1Q8NGG4 311 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 OR1L8Q8NGR8 309 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
PDPN-203ENST00000376061 CLCC1Q96S66 551 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 HINT2Q9BX68 163 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
PDPN-203ENST00000376061 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 A0A0D9SG52 128 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 A6NDX4 124 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 E7EUB6 86 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 FCN1O00602 326 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 NUP62P37198 522 aaPredicted RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 RPL23AP62750 156 aaKnown RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 GNB1P62873 340 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 EWSR1Q01844 656 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDPN-203ENST00000376061 TMEM267Q0VDI3 215 aaPredicted RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 TNXAQ16473 311 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 TEX29Q8N6K0 151 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 Q8N9W7 124 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 OR4C12Q96R67 309 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 ARL6Q9H0F7 186 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 HEYLQ9NQ87 328 aaPredicted RBP8.32□□□□□ -1.08
PDPN-203ENST00000376061 YAE1D1Q9NRH1 226 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 NDUFA4L2Q9NRX3 87 aa8.32□□□□□ -1.08
PDPN-203ENST00000376061 SETXQ7Z333 2677 aaKnown RBP8.31□□□□□ -1.08
PDPN-203ENST00000376061 C15orf62A8K5M9 175 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 BCL2L11O43521 198 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 ACTL6BO94805 426 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 LY86O95711 162 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 S100A11P31949 105 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 RPL27AP46776 148 aaKnown RBP8.31□□□□□ -1.08
PDPN-203ENST00000376061 SPANXN5Q5MJ07 72 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 CLEC9AQ6UXN8 241 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 SPNS3Q6ZMD2 512 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 HAPLN4Q86UW8 402 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 OR10W1Q8NGF6 305 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 BSCL2Q96G97 398 aaPredicted RBP8.31□□□□□ -1.08
PDPN-203ENST00000376061 ZNF48Q96MX3 618 aaPredicted RBP8.31□□□□□ -1.08
PDPN-203ENST00000376061 RBM14Q96PK6 669 aaKnown RBP8.31□□□□□ -1.08
PDPN-203ENST00000376061 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 ZC4H2Q9NQZ6 224 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 C1RLQ9NZP8 487 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 FBXL17Q9UF56 701 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
PDPN-203ENST00000376061 IGLC7A0M8Q6 106 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 CST7O76096 145 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 IGHV4-59P01825 116 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 HLA-DRB1P01911 266 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 METTL15P1P0C7V9 234 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 NDPQ00604 133 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 NHLH2Q02577 135 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 BAXQ07812 192 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 OPCMLQ14982 345 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 LY6EQ16553 131 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 TMEM14EPQ6UXP3 125 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 STX12Q86Y82 276 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 STPG2Q8N412 459 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 C5orf56Q8N8D9 126 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 SRSF12Q8WXF0 261 aaKnown RBP8.3□□□□□ -1.08
PDPN-203ENST00000376061 SMR3AQ99954 134 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 HIPK2Q9H2X6 1198 aa8.3□□□□□ -1.08
PDPN-203ENST00000376061 STRAPQ9Y3F4 350 aaKnown RBP8.3□□□□□ -1.08
PDPN-203ENST00000376061 A0A1W2PN81 502 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 KANTRA0A1W2PQU2 76 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 FGF16O43320 207 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 AMY1AP04745 511 aa8.29□□□□□ -1.08
PDPN-203ENST00000376061 AREGP15514 252 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms