RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SPRY2O43597 315 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 TMEM127O75204 238 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 TMEM217Q8N7C4 229 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 GDPD1Q8N9F7 314 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 DMBX1Q8NFW5 382 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 DIABLOQ9NR28 239 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 TMEM140Q9NV12 185 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 SELENOKQ9Y6D0 94 aa17.28■□□□□ 0.36
C9orf47-202ENST00000375850 SPARTQ8N0X7 666 aa17.27■□□□□ 0.36
C9orf47-202ENST00000375850 CADM3Q8N126 398 aa17.27■□□□□ 0.36
C9orf47-202ENST00000375850 PLECQ15149 4684 aaKnown RBP17.27■□□□□ 0.36
C9orf47-202ENST00000375850 ALMS1Q8TCU4 4167 aa17.27■□□□□ 0.35
C9orf47-202ENST00000375850 LY6G6CO95867 125 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 TRAPPC2P0DI81 140 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 TRAPPC2BP0DI82 140 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 ERVK-16P61578 105 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 LYG2Q86SG7 212 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 GVQW1Q8N7I0 195 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 STPG3Q8N7X2 389 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 OR5AP2Q8NGF4 316 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 OR1L8Q8NGR8 309 aa17.26■□□□□ 0.35
C9orf47-202ENST00000375850 KLK5Q9Y337 293 aaPredicted RBP17.26■□□□□ 0.35
C9orf47-202ENST00000375850 A0A0J9YWU9 116 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 OR4C46A6NHA9 309 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 K7EMT4 169 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 NDUFA4O00483 81 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 SERPINE2P07093 398 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 SDC2P34741 201 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 FXYD4P59646 89 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 AADACL3Q5VUY0 350 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 CEMP1Q6PRD7 247 aaPredicted RBP17.25■□□□□ 0.35
C9orf47-202ENST00000375850 SLC25A38Q96DW6 304 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 AUNIPQ9H7T9 357 aa17.25■□□□□ 0.35
C9orf47-202ENST00000375850 TRAV3A0A0B4J244 114 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 OR13C7P0DN81 318 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 HERV-K104P61576 105 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 PMS2P11Q13670 270 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 ZNF773Q6PK81 442 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 ZNF818PQ6ZRF7 136 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 OR51H1Q8NH63 302 aa17.24■□□□□ 0.35
C9orf47-202ENST00000375850 LSM10Q969L4 123 aaKnown RBP17.24■□□□□ 0.35
C9orf47-202ENST00000375850 YTHDF1Q9BYJ9 559 aaKnown RBP17.24■□□□□ 0.35
C9orf47-202ENST00000375850 C6orf62Q9GZU0 229 aaPredicted RBP17.24■□□□□ 0.35
C9orf47-202ENST00000375850 IGHV3-35A0A0C4DH35 117 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 S1PR2O95136 353 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 PTHLHP12272 177 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 SLC25A24Q6NUK1 477 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 RNF183Q96D59 192 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 C21orf62Q9NYP8 219 aa17.23■□□□□ 0.35
C9orf47-202ENST00000375850 F11RQ9Y624 299 aaKnown RBP17.23■□□□□ 0.35
C9orf47-202ENST00000375850 OR2T8A6NH00 312 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 MARCH11A6NNE9 402 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 CMC4P56277 68 aaPredicted RBP17.22■□□□□ 0.35
C9orf47-202ENST00000375850 DEFB135Q30KP9 77 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 IDNKQ5T6J7 187 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 TMEM17Q86X19 198 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 OR10W1Q8NGF6 305 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 OR5H6Q8NGV6 325 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 GALNT14Q96FL9 552 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 NDUFA4L2Q9NRX3 87 aa17.22■□□□□ 0.35
C9orf47-202ENST00000375850 TEX50A0A1B0GTY4 177 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 C15orf62A8K5M9 175 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 F2RP25116 425 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 MXD1Q05195 221 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 WT1-ASQ06250 92 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 Q9H521 79 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 FKBP11Q9NYL4 201 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 UBQLN2Q9UHD9 624 aa17.21■□□□□ 0.35
C9orf47-202ENST00000375850 SNAPC5O75971 98 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 GNRHRP30968 328 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 ODF3L2Q3SX64 289 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 DHRS11Q6UWP2 260 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 CMTM1Q8IZ96 169 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 TMEM56Q96MV1 263 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 IFT46Q9NQC8 304 aa17.2■□□□□ 0.34
C9orf47-202ENST00000375850 CROCCP3Q8IVE0 287 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 OR5B3Q8NH48 314 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 SCARB1Q8WTV0 552 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 TSC22D3Q99576 134 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 C20orf24Q9BUV8 137 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 PRNDQ9UKY0 176 aa17.19■□□□□ 0.34
C9orf47-202ENST00000375850 XRCC3O43542 346 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 RPA2P15927 270 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 RELQ04864 619 aaPredicted RBP17.18■□□□□ 0.34
C9orf47-202ENST00000375850 TSPAN14Q8NG11 270 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 MOB3AQ96BX8 217 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 MAP6D1Q9H9H5 199 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 EHFQ9NZC4 300 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 OR51B2Q9Y5P1 312 aa17.18■□□□□ 0.34
C9orf47-202ENST00000375850 PGLYRP1O75594 196 aaPredicted RBP17.17■□□□□ 0.34
C9orf47-202ENST00000375850 RLN1P04808 185 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 CLEC2LP0C7M8 214 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 TAS2R46P59540 309 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 Q56UQ5 140 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 DGCR14Q96DF8 476 aaKnown RBP17.17■□□□□ 0.34
C9orf47-202ENST00000375850 S100A16Q96FQ6 103 aaKnown RBP17.17■□□□□ 0.34
C9orf47-202ENST00000375850 CHRDL1Q9BU40 450 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 HINT2Q9BX68 163 aa17.17■□□□□ 0.34
C9orf47-202ENST00000375850 LOC100506127A0A0U1RQW1 187 aa17.16■□□□□ 0.34
C9orf47-202ENST00000375850 K7EIM0 57 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms