RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ARPC1AQ92747 370 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 TMEM56Q96MV1 263 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 TSC22D3Q99576 134 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 AIFM2Q9BRQ8 373 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 TMEM56-RWDD3S4R434 201 aa9.39□□□□□ -0.91
LSM2-208ENST00000375661 FAM240BA0A1B0GVZ2 78 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 E7EUB6 86 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 I3L521 148 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 CNIH1O95406 144 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 TCRBP04435 133 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 FRMD6-AS1P0C7T7 363 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 P0C879 139 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 MYOD1P15172 320 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
LSM2-208ENST00000375661 ERVK-16P61578 105 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 PPP1R1AQ13522 171 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 TNXAQ16473 311 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 TRIM16LQ309B1 348 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 TMEM65Q6PI78 240 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 ZNF491Q8N8L2 437 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 OR1N2Q8NGR9 330 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 LYSTQ99698 3801 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 KCNIP3Q9Y2W7 256 aa9.38□□□□□ -0.91
LSM2-208ENST00000375661 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 A0A0G2JRQ6 117 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 A0A1B0GW64 132 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 OVOL1O14753 267 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 CREBL2O60519 120 aaPredicted RBP9.37□□□□□ -0.91
LSM2-208ENST00000375661 SFT2D2O95562 160 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 HLA-GP17693 338 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 PPIFP30405 207 aaKnown RBP9.37□□□□□ -0.91
LSM2-208ENST00000375661 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
LSM2-208ENST00000375661 ECSCRQ19T08 205 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 IZUMO4Q1ZYL8 232 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 ASPHD1Q5U4P2 390 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
LSM2-208ENST00000375661 C20orf85Q9H1P6 137 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 NSG2Q9Y328 171 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 TNCP24821 2201 aa9.37□□□□□ -0.91
LSM2-208ENST00000375661 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
LSM2-208ENST00000375661 TRAV6A0A075B6T7 132 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 MSGN1A6NI15 193 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 CGB1A6NKQ9 187 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 SOX15O60248 233 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 FGF2P09038 288 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 OR4E1P0C645 316 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 ANXA3P12429 323 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 GP9P14770 177 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 MAS1LP35410 378 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 UBE2MP61081 183 aaKnown RBP9.36□□□□□ -0.91
LSM2-208ENST00000375661 KIAA0141Q14154 515 aaPredicted RBP9.36□□□□□ -0.91
LSM2-208ENST00000375661 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 AKIRIN2Q53H80 203 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 TMEM268Q5VZI3 342 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 UNQ5815/PRO19632Q6UWF5 114 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 Q6ZRM9 215 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 H2BFWTQ7Z2G1 175 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 NRARPQ7Z6K4 114 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 DUSP18Q8NEJ0 188 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 DCUN1D4Q92564 292 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 RBPMSQ93062 196 aaKnown RBP9.36□□□□□ -0.91
LSM2-208ENST00000375661 IL22RA2Q969J5 263 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 TM2D3Q9BRN9 247 aa9.36□□□□□ -0.91
LSM2-208ENST00000375661 ALX4Q9H161 411 aaPredicted RBP9.36□□□□□ -0.91
LSM2-208ENST00000375661 A0A0B4J293 547 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 C9orf170A2RU37 121 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 HMX3A6NHT5 357 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 TEX22C9J3V5 150 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 SAP30O75446 220 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 ACTL6BO94805 426 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 SPNP16150 400 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 VAMP1P23763 118 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 RPL27AP46776 148 aaKnown RBP9.35□□□□□ -0.91
LSM2-208ENST00000375661 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
LSM2-208ENST00000375661 AKR1C2P52895 323 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 DEFA1P59665 94 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 DEFA3P59666 94 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 OR2B8PP59922 312 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
LSM2-208ENST00000375661 DHRS2Q13268 280 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 LGI3Q8N145 548 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 LRTM2Q8N967 370 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 ENKURQ8TC29 256 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 CASTOR1Q8WTX7 329 aa9.35□□□□□ -0.91
LSM2-208ENST00000375661 GPR146Q96CH1 333 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms