RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 QRFPP83859 136 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 NCMAPQ5T1S8 102 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 FOXL2NBQ6ZUU3 175 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 SGMS2Q8NHU3 365 aa14.98□□□□□ -0.01
PTPDC1-202ENST00000375360 CHD8Q9HCK8 2581 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 TGFAP01135 160 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 S100A8P05109 93 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 TPPP2P59282 170 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 SUPT4H1P63272 117 aaKnown RBP14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF324BQ6AW86 544 aaPredicted RBP14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 PRNTQ86SH4 94 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 C7orf69Q9H7B7 122 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 LTBP2Q14767 1821 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 IGHV3-49A0A0A0MS15 119 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 IGHV3-23P01764 117 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 TMEM30BQ3MIR4 351 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 CD177Q8N6Q3 437 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 TMEM56-RWDD3S4R434 201 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 NCOA6Q14686 2063 aaPredicted RBP14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 ABCA2Q9BZC7 2435 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 FAM74A7A6NL05 159 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 YPEL1O60688 119 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 TDGF1P13385 188 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 RNASEKQ6P5S7 137 aaKnown RBP14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 YPEL2Q96QA6 119 aa14.97□□□□□ -0.01
PTPDC1-202ENST00000375360 ZNF137PP52743 207 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 LHFPL1Q86WI0 220 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 RSPO1Q2MKA7 263 aaPredicted RBP14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 STPG3Q8N7X2 389 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 RCC1LQ96I51 464 aaKnown RBP14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 ANKRD11Q6UB99 2663 aaPredicted RBP14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 IGKV3-15P01624 115 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 NHLH1Q02575 133 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 TFF3Q07654 80 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 MBNL2Q5VZF2 373 aaKnown RBP14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 PQLC2Q6ZP29 291 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 C5orf17Q8NAS9 161 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 NHLRC2Q8NBF2 726 aa14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 NOL4LQ96MY1 436 aaPredicted RBP14.96□□□□□ -0.01
PTPDC1-202ENST00000375360 K7EM74 188 aa14.96□□□□□ -0.02
PTPDC1-202ENST00000375360 MFAP4P55083 255 aa14.96□□□□□ -0.02
PTPDC1-202ENST00000375360 COL4A3Q01955 1670 aa14.96□□□□□ -0.02
PTPDC1-202ENST00000375360 E9PQ18 207 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 HAX1O00165 279 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 NAPSAO96009 420 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 RAB5AP20339 215 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 OR2D3Q8NGH3 330 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 FUT9Q9Y231 359 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 UFC1Q9Y3C8 167 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 MFSD2BA6NFX1 497 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 ACAA1P09110 424 aaPredicted RBP14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 NBL1P41271 181 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 DPPA3Q6W0C5 159 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 FA2HQ7L5A8 372 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 PRO3102Q9H379 93 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 SAA1P0DJI8 122 aaPredicted RBP14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 IER3P46695 156 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 PITPNC1Q9UKF7 332 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 FAM3BP58499 235 aaPredicted RBP14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 RNF212Q495C1 297 aa14.95□□□□□ -0.02
PTPDC1-202ENST00000375360 WNK1Q9H4A3 2382 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 NPIPB11E5RHQ5 1161 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 ZNF253O75346 499 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 C8orf88P0DMB2 117 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 IGFBP2P18065 325 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 CRYBB3P26998 211 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 DUTP33316 252 aaKnown RBP14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 HLA-DRB5Q30154 266 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 C20orf204Q6ZNR8 217 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 PRSS3P2Q8NHM4 247 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 THBDP07204 575 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 ADIPOQQ15848 244 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 BPIFA4PQ86YQ2 179 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 ARL2-SNX15V9GYD0 113 aa14.94□□□□□ -0.02
PTPDC1-202ENST00000375360 A0A1W2PNU3 283 aaPredicted RBP14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 C1QTNF9BB2RNN3 333 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 IL4P05112 153 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 C1QTNF9P0C862 333 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 OR51G1Q8NGK1 321 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 LHFPL5Q8TAF8 219 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 TMEM133Q9H2Q1 129 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 MYO9AB2RTY4 2548 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 PMS2P11Q13670 270 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 HIST1H1BP16401 226 aaKnown RBP14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 RPL30P62888 115 aaKnown RBP14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 OR1L6Q8NGR2 347 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 C18orf12Q96KH6 178 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 NPCDR1Q9BY65 106 aa14.93□□□□□ -0.02
PTPDC1-202ENST00000375360 ADAMTS9Q9P2N4 1935 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 B4DEV8 164 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 CRISP2P16562 243 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 MFAP2P55001 183 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 COLCA1Q6ZS62 124 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 ANAPC16Q96DE5 110 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 SNURFLB1AK76 121 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 ZNF273Q14593 569 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 C11orf42Q8N5U0 333 aa14.92□□□□□ -0.02
PTPDC1-202ENST00000375360 TNFSF13O75888 250 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms