RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 HPRT1P00492 218 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-202ENST00000375271 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 RELQ04864 619 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-202ENST00000375271 IRF3Q14653 427 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 KLK9Q2XQG4 91 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 NR2C2APQ86WQ0 139 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 C21orf62Q9NYP8 219 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 ANXA10Q9UJ72 324 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 KLK9Q9UKQ9 250 aa10.42□□□□□ -0.74
PTCH1-202ENST00000375271 IGHV3OR16-8A0A075B7F1 116 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 IGLC7A0M8Q6 106 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TMEM235A6NFC5 223 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 C11orf94C9JXX5 98 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 SULT1C2O00338 296 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 NUPL2O15504 423 aaKnown RBP10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 ADMP35318 185 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TMEM187Q14656 261 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 OGFRL1Q5TC84 451 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-202ENST00000375271 ZBTB34Q8NCN2 500 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TSPAN14Q8NG11 270 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 OR13F1Q8NGS4 319 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 GPHA2Q96T91 129 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 TMEM140Q9NV12 185 aa10.41□□□□□ -0.74
PTCH1-202ENST00000375271 ELF5Q9UKW6 265 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-202ENST00000375271 IGHV3-21A0A0B4J1V1 117 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 C15orf62A8K5M9 175 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 K7EMT4 169 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 UPK2O00526 184 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 RBFOX2O43251 390 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTCH1-202ENST00000375271 S1PR2O95136 353 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 FCGR2CP31995 323 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 FXYD4P59646 89 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 MSMO1Q15800 293 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 AADACL3Q5VUY0 350 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 LINC00336Q6ZUF6 198 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 TMEM116Q8NCL8 245 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 OR51H1Q8NH63 302 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 BORCS5Q969J3 196 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 ATP6V0BQ99437 205 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 SLC5A7Q9GZV3 580 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 CCL28Q9NRJ3 127 aa10.4□□□□□ -0.74
PTCH1-202ENST00000375271 DNASE2O00115 360 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-202ENST00000375271 SNAPC5O75971 98 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 SERPINE2P07093 398 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 MFAP2P55001 183 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 ZNF367Q7RTV3 350 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 OR10W1Q8NGF6 305 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
PTCH1-202ENST00000375271 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
PTCH1-202ENST00000375271 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 SMIM30A4D0T7 59 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 DEFB4AO15263 64 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 PPYP01298 95 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 CD5P06127 495 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 HERV-K104P61576 105 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
PTCH1-202ENST00000375271 EIF4EBP1Q13541 118 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-202ENST00000375271 PRSS48Q7RTY5 328 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 TMEM17Q86X19 198 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 GBGT1Q8N5D6 347 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 BEST4Q8NFU0 473 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 TMEM56Q96MV1 263 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 RNF2Q99496 336 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 PLEKHA2Q9HB19 425 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 COMMD9Q9P000 198 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 BLOC1S6Q9UL45 172 aa10.38□□□□□ -0.75
PTCH1-202ENST00000375271 F11RQ9Y624 299 aaKnown RBP10.38□□□□□ -0.75
PTCH1-202ENST00000375271 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 FGF2P09038 288 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 PRR20EP86478 221 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 PRR20CP86479 221 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 PRR20DP86480 221 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 PRR20BP86481 221 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 PRR20AP86496 221 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 ZNF124Q15973 351 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 C22orf42Q6IC83 251 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 STHQ8IWL8 128 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 DUSP21Q9H596 190 aa10.37□□□□□ -0.75
PTCH1-202ENST00000375271 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 TRAV3A0A0B4J244 114 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 TRDV1A0A1B0GX56 115 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 NOTOA8MTQ0 251 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 CHEK1O14757 476 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 POU2AF1Q16633 256 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 TPRA1Q86W33 373 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
PTCH1-202ENST00000375271 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms